BS32910.complete Sequence
1565 bp assembled on 2014-01-22
GenBank Submission: KX802044
> BS32910.complete
GAAGTTATCAGTCGACATGTGGATAACCGGTCAGTTTGTTTTTCTTCTGC
TGGTGGCACTTGTTGCCGCAAAATCGAAAACCTCGGCGGTGCAGGATGAC
ATCGCGGAGTATAAGGACTTCAAGAAGCTGCTGCGCACCAAGAACAATGT
CCTCGCGCTCTACGTGACCAGTGCGAAATCCGCTGCTGCTGAGCTAAAGA
TATTCCGTGAGGCGGCGGAGGCGATACGGGGAACCGGGACAATGTTGCTG
CTAGATTGCGGACAGCAGGATCGCAAGAAACTGTGCAAGAAGTTGAAGGT
ATCGCCGGACCCCTACGCCATTAAACACTACAAGGATGGCGACTTCCACA
AGGACTACGACCGGCAGCTGAGCGTCAGCTCCATGATCACTTTCATGCGT
GATCCCTCCGGCGATTTGCCCTGGGAGGAGGATCCAGCCGGCAAGGATGT
CCTGCACTTCAGCGATGCCGCATCCTTCACAAAGCATTTACGCAAGGATA
TCCGGCCCATGCTTGTCATGTTCTATGTTCCGTGGTGCGGATTCTGCAAG
AAAATGAAGCCGGAGTACGGAAAAGCGTCCACGGAGTTGAAAACTAAGGG
CGGTTATATTCTGGCGGCTATGAATGTAGAGCGACAGGAGAACGCTCCTA
TACGCAAAATGTTCAACATAACTGGTTTTCCCACCCTGATTTACTTTGAA
AATGGCAAGCTGCGCTTTACATACGAAGGAGAGAACAACAAGGAGGCTTT
GGTGTCTTTTATGCTCAATCCAAATGCCAAGCCAACGCCAAAGCCCAAGG
AACCCGAATGGTCGGCGGATACCAATTCGGAGATTGTCCATCTCACCTCG
CAGGGTTTTGAGCCCGCTCTGAAGGACGAGAAGTCCGCCCTGGTCATGTT
CTATGCACCCTGGTGCGGACACTGTAAGCGCATGAAACCGGAATACGAAA
AGGCCGCTCTGGAGATGAAGCAGAAAAAGATTCCCGGCCTTTTGGCTGCG
TTGGATGCAACGAAGGAGCCGTCAATCGCAGAGAAATATAAAGTCAAGGG
CTATCCAACTGTTAAGTTTTTCTCGAATGGCGTCTTTAAGTTTGAAGTAA
ATGTACGCGAAGCATCGAAAATTGTTGAATTTATGAGAGATCCCAAGGAG
CCCCCACCGCCTCCGCCACCCGAAAAGAGTTGGGAGGAGGAGGAGGACAG
CAAGGAAGTCCTATTTCTGGATGACGACAACTTCAGTTCGACGCTGAAGA
GGAAAAAGCATGCGCTGGTCATGTTCTATGCACCCTGGTGTGGACACTGT
AAGCACACAAAACCGGAGTTTACAGCGGCTGCCACGGCCTTACAGGATGA
TCCTCGGATAGCGTTTGTCGCCATCGACTGCACAAAGCTTGCCGCGCTCT
GCGCAAAGTATAACGTACGCGGATATCCCACCATTCTGTACTTCTCTTAC
CTCAAAACCAAGCTGGATTACAATGGCGGACGCACCAGCAAGGACTTTAT
CGCCTATATGAACAACCCGCCTACCTCAGCGGACCGCACAGAGCTGTGAA
AGCTTTCTAGACCAT
BS32910.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:47:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9302-RA | 1533 | CG9302-PA | 1..1533 | 17..1549 | 7575 | 99.6 | Plus |
| CG9302-RA | 1533 | CG9302-PA | 1249..1301 | 890..942 | 205 | 92.5 | Plus |
| CG9302-RA | 1533 | CG9302-PA | 874..926 | 1265..1317 | 205 | 92.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:47:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9302-RA | 1972 | CG9302-RA | 182..1714 | 17..1549 | 7575 | 99.6 | Plus |
| CG9302-RA | 1972 | CG9302-RA | 1055..1107 | 1265..1317 | 205 | 92.5 | Plus |
| CG9302-RA | 1972 | CG9302-RA | 1430..1482 | 890..942 | 205 | 92.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:47:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13377698..13378357 | 676..17 | 3255 | 99.5 | Minus |
| 2L | 23513712 | 2L | 13377038..13377651 | 1287..674 | 3025 | 99.5 | Minus |
| 2L | 23513712 | 2L | 13376713..13376975 | 1549..1287 | 1315 | 100 | Minus |
| 2L | 23513712 | 2L | 13377383..13377435 | 1317..1265 | 205 | 92.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:47:43 has no hits.
BS32910.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:21 Download gff for
BS32910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9302-RA | 182..1713 | 17..1548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:15 Download gff for
BS32910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9302-RA | 182..1713 | 17..1548 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:15 Download gff for
BS32910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13376714..13376975 | 1287..1548 | 100 | <- | Minus |
| 2L | 13377039..13377650 | 675..1286 | 99 | <- | Minus |
| 2L | 13377700..13378357 | 17..674 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:21 Download gff for
BS32910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13376714..13376975 | 1287..1548 | 100 | <- | Minus |
| arm_2L | 13377039..13377650 | 675..1286 | 99 | <- | Minus |
| arm_2L | 13377700..13378357 | 17..674 | 99 | | Minus |
BS32910.pep Sequence
Translation from 16 to 1548
> BS32910.pep
MWITGQFVFLLLVALVAAKSKTSAVQDDIAEYKDFKKLLRTKNNVLALYV
TSAKSAAAELKIFREAAEAIRGTGTMLLLDCGQQDRKKLCKKLKVSPDPY
AIKHYKDGDFHKDYDRQLSVSSMITFMRDPSGDLPWEEDPAGKDVLHFSD
AASFTKHLRKDIRPMLVMFYVPWCGFCKKMKPEYGKASTELKTKGGYILA
AMNVERQENAPIRKMFNITGFPTLIYFENGKLRFTYEGENNKEALVSFML
NPNAKPTPKPKEPEWSADTNSEIVHLTSQGFEPALKDEKSALVMFYAPWC
GHCKRMKPEYEKAALEMKQKKIPGLLAALDATKEPSIAEKYKVKGYPTVK
FFSNGVFKFEVNVREASKIVEFMRDPKEPPPPPPPEKSWEEEEDSKEVLF
LDDDNFSSTLKRKKHALVMFYAPWCGHCKHTKPEFTAAATALQDDPRIAF
VAIDCTKLAALCAKYNVRGYPTILYFSYLKTKLDYNGGRTSKDFIAYMNN
PPTSADRTEL*
BS32910.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9302-PA | 510 | CG9302-PA | 1..510 | 1..510 | 2710 | 100 | Plus |
| prtp-PC | 416 | CG1837-PC | 56..407 | 165..498 | 325 | 25.1 | Plus |
| prtp-PB | 416 | CG1837-PB | 56..407 | 165..498 | 325 | 25.1 | Plus |
| prtp-PA | 416 | CG1837-PA | 56..407 | 165..498 | 325 | 25.1 | Plus |
| prtp-PC | 416 | CG1837-PC | 10..274 | 244..502 | 317 | 29.9 | Plus |
| prtp-PB | 416 | CG1837-PB | 10..274 | 244..502 | 317 | 29.9 | Plus |
| prtp-PA | 416 | CG1837-PA | 10..274 | 244..502 | 317 | 29.9 | Plus |
| CaBP1-PB | 433 | CG5809-PB | 27..263 | 273..500 | 305 | 31.4 | Plus |
| prtp-PC | 416 | CG1837-PC | 175..388 | 153..355 | 218 | 26.5 | Plus |
| prtp-PB | 416 | CG1837-PB | 175..388 | 153..355 | 218 | 26.5 | Plus |
| prtp-PA | 416 | CG1837-PA | 175..388 | 153..355 | 218 | 26.5 | Plus |
