Clone BS32916 Report

Search the DGRC for BS32916

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:329
Well:16
Vector:pDNR-Dual
Associated Gene/TranscriptCG13526-RA
Protein status:BS32916.pep: gold
Sequenced Size:497

Clone Sequence Records

BS32916.complete Sequence

497 bp assembled on 2014-01-22

GenBank Submission: KX802610

> BS32916.complete
GAAGTTATCAGTCGACATGCCTTCTTTTTCCGGCAATGAGCTGACGAATG
AGCATATCGACGAACTGAGGGATGCCTTTGAAAAGTATGATCTGGACTCG
AATGGCACTCTATCAGCCAACGAGGTGCGACTGGCTCTAATATCAGTGGG
TTACGAAATCACTGAGGCAGAGTTGTACGATCTCATCCATTCGGTGGCTG
TGAGAGACGAGGAGAGGCTGGACTTGAAAAAATTTATACGCATGATGGCG
CCCCGAATGGCCAATGTGGATAGTGATAAAAGTCTATGCCGGACCTTTAA
CATGATTGACCGCGATCGCGACGGCTACGTCACCGTCCAGGATGTTCGTG
CCATTATGGTCGTCCTGGGCGAAGTCGTAACCGATGACGATATTAAGGAT
ATCTGCCAAGCAGTCGATATGGATGGCGATGGTCGCATAAGCTTGCGCGA
TTTCGTAGGCTTTATGCACAGCCCCATTTGAAAGCTTTCTAGACCAT

BS32916.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:47:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG13526-RA 465 CG13526-PA 1..465 17..481 2295 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG13526-RA 678 CG13526-RA 106..571 16..481 2300 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22755324..22755789 16..481 2300 99.6 Plus
Blast to na_te.dros performed on 2014-11-28 14:47:57 has no hits.

BS32916.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:27 Download gff for BS32916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13526-RA 107..570 17..480 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:21 Download gff for BS32916.complete
Subject Subject Range Query Range Percent Splice Strand
CG13526-RA 107..570 17..480 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:21 Download gff for BS32916.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22755325..22755788 17..480 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:27 Download gff for BS32916.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18642830..18643293 17..480 99   Plus

BS32916.pep Sequence

Translation from 16 to 480

> BS32916.pep
MPSFSGNELTNEHIDELRDAFEKYDLDSNGTLSANEVRLALISVGYEITE
AELYDLIHSVAVRDEERLDLKKFIRMMAPRMANVDSDKSLCRTFNMIDRD
RDGYVTVQDVRAIMVVLGEVVTDDDIKDICQAVDMDGDGRISLRDFVGFM
HSPI*

BS32916.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG13526-PA 154 CG13526-PA 1..154 1..154 785 100 Plus
Cam-PD 149 CG8472-PD 3..148 7..152 278 34.2 Plus
Cam-PC 149 CG8472-PC 3..148 7..152 278 34.2 Plus
Cam-PE 149 CG8472-PE 3..148 7..152 278 34.2 Plus
Cam-PB 149 CG8472-PB 3..148 7..152 278 34.2 Plus