BS32917.complete Sequence
1451 bp assembled on 2014-01-22
GenBank Submission: KX803942
> BS32917.complete
GAAGTTATCAGTCGACATGTGGCCTCCAGGGAGCGAGGATAGCTACTCCG
CCAAAATGGACTACGGCAAGAGCGTGGTGAACATCCTGCCCAGCGTAGAG
ATGCTGGTGAACTTTAATGGCGAAATGACGCGGTCTAGCAAACGGTCATG
TCTACTGTACGCGGAGAGAGTGGACTTCAAGGAGCTGCTGCAACTCCGAT
TAACGGAGAAGTCCGATCAACGGCGCATGTACATCACCACAGTGGACAGC
GCCTCCTTTCAGGATCTCAAACAGGATCAGTCGCTGAATGTGTCATTCTC
TGGGTTCATTGACAATGTAGTGCGCATGCTGAAGGACTGCCAGTCGGGTA
AACTGGAGCTGCACCTGACCACACGGGATCAGAACCTTTCATCCGGCAGG
GAGGTCCACGACTATTATCTTCAGTTTGTTGAAATTCGGTCCTTTAAGAA
CCTGGTTCACCTTAGCCTGCCTTGTCGTTCTGCTCCCTTGAACACCGTAC
TCTTCTACATAAACAGCATGCTGGAAGCCTCCCACAAAAAGCAATATATT
CTCGAGCAAAGTATGCAGCAAATGCAGGCTGAAATCAACGCACAACGCGC
GCATGCGGAAAGGTTGACCACGGAAAACACAAATATCAGGGAAGCTTTGG
CCGAAAATACTCGCATCTTAGAGGAAAAGCATGCTGCCGAGGTCCATCAA
TACCAGGAAAAACTGTCCAAAATAAACGAGCAGCGCAGCAATGAGCTGGA
GAGAAATCGTAGAGCGATCTCCGGCTTTCAGGCCCAATTGGACAAGGCTT
CGTTGGAGAAAGCAGAACTAAAGTCGGCCCAAGAGCAGGCCGAGAAACGA
TGTCAAACCCTGTCCGAGGAGTTGTCCTGTTGCAAAGCCAGAGTGTGCAC
TCTAAAAGAGCAAAATGACAAACTGCACGGGGATGTGGCCAACATCAGGA
AGCATGAACGCAAGTTGGAGTACAAAATCGAGGACCTCAAGCAGCACACT
GTCGAGCTGCAGGAACATATTCAAAAGGGAAACAAAGAGAAGGCCAACAT
AGCCGCTGAACTGGAGGCCGAGAAGAAGATCCTGCACACCAAGCGCCAGG
CTTTGGAAATGGCCTCCGAGGAGATCTCCAAGGCCAACCAGATAATCGTT
AAACAAAGCCAGGAGCTGCTCAACCTCAAAAAGACCATTGCCTGGCGCAC
AGAGGTGGCTCTGCAGCAAGAAAAGGCGGTTCAGGCCAAGGAGAGCCTAC
TATCCCTGAGGGAGAATGAGCTGCGCGAGGCTCGAATAACTATTGAAAAA
CTGAGGGAGGAAATCCCCCAGCAACTGCAATCCATGCGTAACTTTGCCCA
GGGACTGGAGCAGAAGTATTCCAAACAAATCCTCATTCTAAAAGAACGGC
TTGCAATACCCACGGGCAAAGAAAACCGGCGATAGAAGCTTTCTAGACCA
T
BS32917.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:48:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas-6-RA | 1419 | CG15524-PA | 1..1419 | 17..1435 | 6975 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:48:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas-6-RA | 1507 | CG15524-RA | 10..1429 | 16..1435 | 6980 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:48:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29995599..29996452 | 190..1043 | 4210 | 99.5 | Plus |
| 3R | 32079331 | 3R | 29996508..29996843 | 1041..1376 | 1650 | 99.4 | Plus |
| 3R | 32079331 | 3R | 29995366..29995540 | 16..190 | 860 | 99.4 | Plus |
| 3R | 32079331 | 3R | 29996898..29996956 | 1377..1435 | 280 | 98.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:48:01 has no hits.
BS32917.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:28 Download gff for
BS32917.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas-6-RA | 11..1429 | 17..1435 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:22 Download gff for
BS32917.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sas-6-RA | 11..1429 | 17..1435 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:22 Download gff for
BS32917.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29995367..29995540 | 17..190 | 99 | -> | Plus |
| 3R | 29995600..29996451 | 191..1042 | 99 | -> | Plus |
| 3R | 29996510..29996843 | 1043..1376 | 99 | -> | Plus |
| 3R | 29996898..29996956 | 1377..1435 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:28 Download gff for
BS32917.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25821089..25821262 | 17..190 | 99 | -> | Plus |
| arm_3R | 25821322..25822173 | 191..1042 | 99 | -> | Plus |
| arm_3R | 25822232..25822565 | 1043..1376 | 99 | -> | Plus |
| arm_3R | 25822620..25822678 | 1377..1435 | 98 | | Plus |
BS32917.pep Sequence
Translation from 16 to 1434
> BS32917.pep
MWPPGSEDSYSAKMDYGKSVVNILPSVEMLVNFNGEMTRSSKRSCLLYAE
RVDFKELLQLRLTEKSDQRRMYITTVDSASFQDLKQDQSLNVSFSGFIDN
VVRMLKDCQSGKLELHLTTRDQNLSSGREVHDYYLQFVEIRSFKNLVHLS
LPCRSAPLNTVLFYINSMLEASHKKQYILEQSMQQMQAEINAQRAHAERL
TTENTNIREALAENTRILEEKHAAEVHQYQEKLSKINEQRSNELERNRRA
ISGFQAQLDKASLEKAELKSAQEQAEKRCQTLSEELSCCKARVCTLKEQN
DKLHGDVANIRKHERKLEYKIEDLKQHTVELQEHIQKGNKEKANIAAELE
AEKKILHTKRQALEMASEEISKANQIIVKQSQELLNLKKTIAWRTEVALQ
QEKAVQAKESLLSLRENELREARITIEKLREEIPQQLQSMRNFAQGLEQK
YSKQILILKERLAIPTGKENRR*
BS32917.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sas-6-PA | 472 | CG15524-PA | 1..472 | 1..472 | 2360 | 100 | Plus |
| mud-PG | 1933 | CG12047-PG | 1365..1681 | 162..455 | 168 | 19.4 | Plus |
| mud-PI | 2113 | CG12047-PI | 1365..1681 | 162..455 | 168 | 19.4 | Plus |
| mud-PJ | 2165 | CG12047-PJ | 1365..1681 | 162..455 | 168 | 19.4 | Plus |
| mud-PF | 2394 | CG12047-PF | 1365..1681 | 162..455 | 168 | 19.4 | Plus |
| mud-PG | 1933 | CG12047-PG | 1237..1507 | 181..454 | 165 | 22.3 | Plus |
| mud-PI | 2113 | CG12047-PI | 1237..1507 | 181..454 | 165 | 22.3 | Plus |
| mud-PJ | 2165 | CG12047-PJ | 1237..1507 | 181..454 | 165 | 22.3 | Plus |
