BS32922.complete Sequence
2477 bp assembled on 2014-03-03
GenBank Submission: KX802763
> BS32922.complete
GAAGTTATCAGTCGACATGGAAAATCAAAAGGATCTGGTTACCCAGAGCA
CATGGCGCCGCATCATGGAGCACCTGACCCCGGTGAAAGGATACAAAGCG
GCAGAAAGGAGAGTCAGCTGGTACCGAGGACTGTCCCAATCCCAGATGGC
GGCAGCAAATGCTTTGTTCGATATCCTGAGGGAAAATATGGATAAGAATA
CCACCTCTAATGTTGCGAAGCTCATGGTGAAACTGGGACTACATCCCTAT
CCGCCGTGGAAAACTCTGCATATGGTGATCAAACTGAGCCGAGGTAATGA
TCTGGCCTTCCTCTGGTTCCTCATGGAAATGTGCTACAAAACACCCAATC
ATGGCGAGACGTACAGTGTCAACGAGCAGATCATCATGACGGCTATCTTT
CGGTTGGACCTCTTTCCCACTCTGAGGGAGCTGGACCGCTGGCTGCCCCT
GCCACATTCATCGCAATCGGATAGGGATAAAGCAGACGCCCTAAGGCAGA
GAAATCAGAGATTGAAGAAGGAGAAAGAGGATAAGCGCCAGAGGGATTTG
GACAGAAAAGCGAAGATCGTGAAACCTCTATCTCCTTACTTTCAGGAACC
CAATATTCCCGGGAAAATTCGAAACGAGCGAAAATTGCTGTCGGACTATC
CAGACACTGCAGCCACGCTATTTCACATGGATGAGGAACCCCTCGAAGCT
TACCTCTGGTCCCGCTGGTTCGGAACCTACACCTTGAACGACGCTCATCG
TGTGGGAAAATCCATAATCTACGAGGAGATTAACAACATTTTCGAGTCCT
TCAAGGCAGCCTCTCTGCCAACCCGACACGTGGAATCCTTATGTGCCCAT
CATCAGTTCATTCGGGAGATGGAGAAGTCTCTGAAGGACAAGCTGGAGAC
GATGAAGCGGAGAAAGTGCGAAGAGCTTATCGAAGCGAAAAATAGACTGG
AGGAGAGAAAGCGTAAGCGGGTGATTCAGGAGCTGGAAGAAATGAGTGCC
TGCTACTTGAAGCGGTTCCAGGAAATGGCTGCCAGAGCCAGATTGGCCTC
CACCAGTAAGCAACTCTTTGGCGGTAGTTCCGTGAAGGCATCTTATTTTG
ACTGTCCCGATAATGAGATCAGATGTGATGATTTCGATGTAGAAAAGTGT
CAGACATTTGAGGCGGAACGGTTAACGAAAAATCATATAGGCGATACACC
CAAAAGTGCAAGTGGTAATAATATTAGGCTAGCAAGCGGGGCACAGGCCA
AATCCAAAACAAGATCCAGATCCAGATCTAGATCAAAAAGCAGGAGATCA
AGGAAGCCTCAAAGTAAAGCGCGATCCATTAAAGAGCCTGAAGTATTGGT
AGAAACTCCTGTACTCCCTCCCAGAACGGCAAAGGAAGATTTTCGCGATA
TCACGATCAGGTTATTAGAAGGAGAAAACCCCATCTTAAAAGGGTGTCCG
GCCTTGCAATTGGAATCTCCACACTGCGCCAAGTGCCTAATTTTCGACCC
ACAAAAGGGTTTACCCCAAAAACCGCAAAAAAAACACCGGCCTAGTAGCC
TAATGCAGTTCCTACAAAATTGCCCCTCTGAAGGGAATGAGGAGGAGGAT
TCTCACAACGAAATGGCTGCTAATCCTTCCGCCCATTCCGTTCAGGAACC
CAAGCTTTTCGATCTGGGACTCTTAGGAAGGAATTGCGCGAGGTTCAACT
ATCGTGAGTTGTTTGGCTCTCTGCAGAGGACTCATTTGGACGACGAACGG
ATGCGTCTAAAGGAGGCCTTTGTAAGAGCCATCGACGATGATGTTCAGTA
CCTCAGTGCGGCCTTAAGTGGCGAGGAAGAGGGTTCTCTGGATGCTTTGG
TGGACCGAGCAGCCAAGAGGGTGTTTGCGCAAGATGTTAAGGCCTTTCAC
GAGGAGCTAGAAAAGATGCATAAGCAAAAAGCAGCTAAAAAGTATAAGTC
TGATTCTCGTTTGAATTTCGGCCAAGAGTTTTACGATCCCGAGAATATCC
CCTTGATGAAGGAGATGCTAAGGTTGGGCCTCGAAAAGGTGGCCCAGGAC
AAAAGATATGTATTGCCCACCCTCCCCGATGTTCACTCTGTGCCCTACCT
CATCGAATGGATACGATTACGTTATGGAAAACGCTATTCCTATGGGGAAA
AGGAACAGATTTTGAATAGAGATAAACTGGTCATGGATCAAATAACATGG
ATGATGCACACCAATCTCGCAAAGATTCCTGCCCTGCCGATTGGAGACAA
CTTTACAGACATGACCAAGCTGAGGGAGTTGACCAAGAAGTTCAGGGAAC
GCCATACCAATAAGTTCCTTGAAGCCATCATGGAAGTGGAGAGGGTCTTT
TATTCGGCCATGAAACCCCATCTCTGCAATTTAGCAACTGAGGAGACCTT
TTTGGCCTACTTGCCTGCCCATTTCCACGACCTGGGCTTCACTGTTAATA
CCGTAAGCTGAAAGCTTTCTAGACCAT
BS32922.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:03:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15548-RA | 2445 | CG15548-PA | 1..2445 | 17..2461 | 11970 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:03:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15548-RA | 2608 | CG15548-RA | 108..2552 | 17..2461 | 11970 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:03:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30959807..30962251 | 17..2461 | 11970 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:03:49 has no hits.
BS32922.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:25:42 Download gff for
BS32922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15548-RA | 108..2551 | 17..2460 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:30:32 Download gff for
BS32922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15548-RA | 108..2551 | 17..2460 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:30:32 Download gff for
BS32922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30959807..30962250 | 17..2460 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:25:42 Download gff for
BS32922.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26785529..26787972 | 17..2460 | 99 | | Plus |
BS32922.pep Sequence
Translation from 16 to 2460
> BS32922.pep
MENQKDLVTQSTWRRIMEHLTPVKGYKAAERRVSWYRGLSQSQMAAANAL
FDILRENMDKNTTSNVAKLMVKLGLHPYPPWKTLHMVIKLSRGNDLAFLW
FLMEMCYKTPNHGETYSVNEQIIMTAIFRLDLFPTLRELDRWLPLPHSSQ
SDRDKADALRQRNQRLKKEKEDKRQRDLDRKAKIVKPLSPYFQEPNIPGK
IRNERKLLSDYPDTAATLFHMDEEPLEAYLWSRWFGTYTLNDAHRVGKSI
IYEEINNIFESFKAASLPTRHVESLCAHHQFIREMEKSLKDKLETMKRRK
CEELIEAKNRLEERKRKRVIQELEEMSACYLKRFQEMAARARLASTSKQL
FGGSSVKASYFDCPDNEIRCDDFDVEKCQTFEAERLTKNHIGDTPKSASG
NNIRLASGAQAKSKTRSRSRSRSKSRRSRKPQSKARSIKEPEVLVETPVL
PPRTAKEDFRDITIRLLEGENPILKGCPALQLESPHCAKCLIFDPQKGLP
QKPQKKHRPSSLMQFLQNCPSEGNEEEDSHNEMAANPSAHSVQEPKLFDL
GLLGRNCARFNYRELFGSLQRTHLDDERMRLKEAFVRAIDDDVQYLSAAL
SGEEEGSLDALVDRAAKRVFAQDVKAFHEELEKMHKQKAAKKYKSDSRLN
FGQEFYDPENIPLMKEMLRLGLEKVAQDKRYVLPTLPDVHSVPYLIEWIR
LRYGKRYSYGEKEQILNRDKLVMDQITWMMHTNLAKIPALPIGDNFTDMT
KLRELTKKFRERHTNKFLEAIMEVERVFYSAMKPHLCNLATEETFLAYLP
AHFHDLGFTVNTVS*
BS32922.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:02:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15548-PA | 814 | CG15548-PA | 1..814 | 1..814 | 4256 | 100 | Plus |
| CG9861-PA | 898 | CG9861-PA | 19..863 | 35..802 | 327 | 21.2 | Plus |
| CG13127-PA | 734 | CG13127-PA | 7..298 | 25..324 | 302 | 28.8 | Plus |
| ssp5-PA | 711 | CG14735-PA | 4..295 | 27..324 | 266 | 28.1 | Plus |
| CG42820-PA | 689 | CG13394-PB | 15..336 | 34..334 | 247 | 26.2 | Plus |
| ssp5-PA | 711 | CG14735-PA | 557..709 | 656..806 | 203 | 30.7 | Plus |
