BS32929.complete Sequence
446 bp assembled on 2014-01-22
GenBank Submission: KX801290
> BS32929.complete
GAAGTTATCAGTCGACATGAAATTCCTCGCCGTCTGCTTCTTCGCTGTTG
TGGCTGTGGCTGCTGCCAAACCCGGTATTGTGGCTCCTCTGGCCTACACC
GCTCCGGCTGTGGTGGGCAGTGCCGCCTACGTGGCTCCCTACGCCTCCAG
CTACACCGCCAACTCGGTGGCCCACAGCGCCGCCTTCCCAGCTGCCTACA
CCGCCGCCTACACTGCTCCCGTTGCTGCTGCCTATACCGCTCCAGTGGCT
GCTGCTTATACCGCTCCAGTGGCCGCTGCGTACGCCGCCCCAGCTGCCTA
TACCGCTGCCTACACCGCCCCCATTGCCCGTTATGCCGCCACCCCCTTCG
CAGCACCCATCGCCGCTCCCGTGGCTGCCGCCTACACCGCCCCCATCGCC
GCCGCTGCCCCAGTTCTGCTGAAGAAGTAAAAGCTTTCTAGACCAT
BS32929.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:48:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13674-RB | 414 | CG13674-PB | 1..414 | 17..430 | 2070 | 100 | Plus |
CG13674-RA | 414 | CG13674-PA | 1..414 | 17..430 | 2070 | 100 | Plus |
CG13679-RB | 360 | CG13679-PB | 1..266 | 17..267 | 830 | 88.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:48:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13674-RB | 559 | CG13674-RB | 65..480 | 15..430 | 2080 | 100 | Plus |
CG13674-RA | 687 | CG13674-RA | 65..480 | 15..430 | 2080 | 100 | Plus |
CG13679-RB | 489 | CG13679-RB | 66..333 | 15..267 | 840 | 88.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:48:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8218439..8218843 | 430..26 | 2025 | 100 | Minus |
3L | 28110227 | 3L | 8202934..8203189 | 27..267 | 795 | 88.3 | Plus |
3L | 28110227 | 3L | 8222536..8222651 | 83..198 | 550 | 98.3 | Plus |
3L | 28110227 | 3L | 8222475..8222532 | 37..94 | 230 | 93.1 | Plus |
3L | 28110227 | 3L | 8203128..8203186 | 230..288 | 190 | 88.1 | Plus |
Blast to na_te.dros performed 2014-11-28 14:48:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 1061..1148 | 308..221 | 134 | 61.4 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6850 | 309..213 | 127 | 60.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6828 | 308..214 | 124 | 58.9 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6724..6817 | 309..213 | 118 | 59.8 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2312..2374 | 279..214 | 116 | 66.7 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2778..2856 | 296..221 | 109 | 62 | Minus |
BS32929.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:33 Download gff for
BS32929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13674-RA | 67..478 | 17..428 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:29 Download gff for
BS32929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13674-RA | 67..478 | 17..428 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:29 Download gff for
BS32929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8218441..8218847 | 22..428 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:33 Download gff for
BS32929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8211541..8211947 | 22..428 | 99 | | Minus |
BS32929.pep Sequence
Translation from 16 to 429
> BS32929.pep
MKFLAVCFFAVVAVAAAKPGIVAPLAYTAPAVVGSAAYVAPYASSYTANS
VAHSAAFPAAYTAAYTAPVAAAYTAPVAAAYTAPVAAAYAAPAAYTAAYT
APIARYAATPFAAPIAAPVAAAYTAPIAAAAPVLLKK*
BS32929.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13674-PB | 137 | CG13674-PB | 1..137 | 1..137 | 673 | 100 | Plus |
CG13674-PA | 137 | CG13674-PA | 1..137 | 1..137 | 673 | 100 | Plus |
CG13679-PB | 119 | CG13679-PB | 1..115 | 1..119 | 426 | 74.2 | Plus |
CG13678-PA | 128 | CG13678-PA | 3..128 | 2..137 | 362 | 63.7 | Plus |
CG13047-PB | 170 | CG13047-PB | 3..165 | 2..132 | 208 | 41.8 | Plus |