BS32933.complete Sequence
1856 bp assembled on 2014-03-03
GenBank Submission: KX804851
> BS32933.complete
GAAGTTATCAGTCGACATGCCATACCATCGAGGCGGAGATGCCTCTTCCC
AGGCCGACAAGCTGAGCGGCATCGTGGAGGAGAGCGATCTGTACGAAGGG
TTCGCCCCGCATGTCGAGACGTCCGAGATCAAAACCCTCGACTTCTACAA
TTTACCAAAGCAAACTGGCAAGGAACCGGCACTGCGCTCCTACACGGAAA
TCCAGCAGCTGCTGCAGCAGGGCAAGAAGCGCGACGTGAAGAACATACTC
AGGGAGAACTCGTGGCCCATTAACTCCCCGATCCGAGCCCAGCTATGGCC
GATGTTGTGTGGCCAGCACCAGACCAAACAGCAAATGCTAGATGGCTTCT
ACTGGGAGATGGTTCACCAGGTCTTTGGCACCACGGAGCTGTCGGAGAAG
CCGATCATGCTGCCCGCCTTTGTGGATGCCACCCACTGTTTGCCCTACCA
CTTGACCAGCACGGGACGAGCCGTGGCCGATCGCATCGTGAATGTCCTGG
GCTACGACTGCCCCGATATTACCTACAGTCCAGTATTGTATCCCATTACA
TCGATACTTTTGCATTTCATGTCGGAGGAGGAGGCGTACATATGTCTGGC
CGGTCTGGTCGGTAGCAAGGAGAAGGTATTCATCAATCAAACCAAACTAC
AGCACGAAGTCACTTGGAAGACGGTGATGCAGATAGCCAAAAAGCACACA
AAAAGTGCTACTTCGTATTTCCAACGTATTTGCCCGGGCCTGAAGCTAGA
ACGCATCTTCATGGACTGGTGCTGGTGGATTCTAGCCGGTCTACCCTTCC
AGCATCTGGTGCGGATCATGGACTGCTACTTCCACGAGGGCATCAAGGTC
CTGTACCGCGTGGCCCTCGTCATACTCAACCTGTTTCACAAGGAGTGCCA
GTCGAACAACGAATGGAGTCCGGACAACATTAAAAACGACATTGGCAACG
CTTTGATCAAGTTCTGCAAGAAGATACCAGTGTCGCCGGCGAAGTTGCTC
CATGCCGCGTTTAGTATTAGGGGACTGAGTACCCAGTATATTTCTAGAAT
ATTTATCAAGACTGAAATGCTACTAAAAAGCCGCTCCGTGCTCACCAGCG
GTTCGAAGCAATTAATCAAATCGCGTTCAAGTGATAATCTGCCCACTAGT
CAGTCGCAGGTCAACATCCAAATGATGTCCCACACCCTGACCATCCGAGA
GAAGCTGCACTCCGAGAGCTGTCGCAATTTGGGTGAAAAATCGCCCGGTC
ATAGAGCAATCGCGATGGGCGTTTATCCCATACACAATCTGAAAAGTCAA
GCTTGTAAGAACGAAGATCTGTTCACGCTGTGGTCCTGGCTGCCCGTGCG
GATAACAATGTACCAACCGGTGCTGCTCTACACCACGGAGGAGCACGGCT
GCTCACTAACCACGTTCTACGTTCGGGTGGAGCAGCATGAACCCACGCTG
CTCATGATCAAGACGTGCAATAATGAGGTATTTGGTGCCTACTGCTCTTC
GCGCTGGTTTGAAAGAAATGTAAAAGATGACAAGGGCCAGCGACAGGCCT
ACTTCGGTACGGGCGAAACCTTTTTGTTCTCCCTATATCCAGAAAGAGCC
AAGTACCCATGGGTGGGCATTGAGGGCGACAAGGACCTGGGACACAGCTC
CGAACTATTTATGGCGGCCGACTCCAAGATGATCACTATTGGTGGCGGCG
AGGGGCAGGCCATCTGGATGGACGAGAACATTCGTTTCGGAAAGACGGAC
AGCTGCAAGACCTTTAACAATCCGCCGCTGTGTCCGTCGGGCGACTTCGA
GATTCGGGTGCTGGAAGTCTACGGATTCGTGGGCATCTAAAAGCTTTCTA
GACCAT
BS32933.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:04:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sky-RJ | 1824 | CG9339-PJ | 1..1824 | 17..1840 | 9120 | 100 | Plus |
| sky-RL | 1821 | CG9339-PL | 1..1821 | 17..1840 | 9040 | 99.8 | Plus |
| sky-RK | 1794 | CG9339-PK | 1..1185 | 17..1201 | 5925 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:04:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sky-RJ | 5002 | CG9339-RJ | 765..2597 | 17..1849 | 9135 | 99.9 | Plus |
| sky-RL | 4921 | CG9339-RL | 687..2516 | 17..1849 | 9055 | 99.7 | Plus |
| CG43739-RA | 4863 | CG43739-RA | 743..1927 | 17..1201 | 5925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:04:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20877149..20877477 | 1029..701 | 1645 | 100 | Minus |
| 2L | 23513712 | 2L | 20873957..20874179 | 1698..1476 | 1115 | 100 | Minus |
| 2L | 23513712 | 2L | 20881987..20882194 | 575..368 | 1040 | 100 | Minus |
| 2L | 23513712 | 2L | 20882260..20882465 | 372..167 | 1030 | 100 | Minus |
| 2L | 23513712 | 2L | 20876912..20877085 | 1201..1028 | 870 | 100 | Minus |
| 2L | 23513712 | 2L | 20874271..20874432 | 1480..1319 | 810 | 100 | Minus |
| 2L | 23513712 | 2L | 20903015..20903166 | 168..17 | 760 | 100 | Minus |
| 2L | 23513712 | 2L | 20873740..20873891 | 1849..1698 | 730 | 98.7 | Minus |
| 2L | 23513712 | 2L | 20877553..20877678 | 700..575 | 630 | 100 | Minus |
| 2L | 23513712 | 2L | 20875638..20875725 | 1318..1231 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:04:07 has no hits.
BS32933.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:25:47 Download gff for
BS32933.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sky-RJ | 765..2586 | 17..1838 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:30:39 Download gff for
BS32933.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sky-RJ | 765..2586 | 17..1838 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:30:39 Download gff for
BS32933.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20882262..20882464 | 168..370 | 100 | <- | Minus |
| 2L | 20903016..20903166 | 17..167 | 100 | | Minus |
| 2L | 20881987..20882191 | 371..575 | 100 | <- | Minus |
| 2L | 20873751..20873890 | 1699..1838 | 100 | <- | Minus |
| 2L | 20873957..20874177 | 1478..1698 | 100 | <- | Minus |
| 2L | 20874274..20874432 | 1319..1477 | 100 | <- | Minus |
| 2L | 20875638..20875724 | 1232..1318 | 100 | <- | Minus |
| 2L | 20876587..20876616 | 1202..1231 | 100 | <- | Minus |
| 2L | 20876912..20877083 | 1030..1201 | 100 | <- | Minus |
| 2L | 20877149..20877477 | 701..1029 | 100 | <- | Minus |
| 2L | 20877553..20877677 | 576..700 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:25:47 Download gff for
BS32933.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20881987..20882191 | 371..575 | 100 | <- | Minus |
| arm_2L | 20882262..20882464 | 168..370 | 100 | <- | Minus |
| arm_2L | 20903016..20903166 | 17..167 | 100 | | Minus |
| arm_2L | 20873751..20873890 | 1699..1838 | 100 | <- | Minus |
| arm_2L | 20873957..20874177 | 1478..1698 | 100 | <- | Minus |
| arm_2L | 20874274..20874432 | 1319..1477 | 100 | <- | Minus |
| arm_2L | 20875638..20875724 | 1232..1318 | 100 | <- | Minus |
| arm_2L | 20876587..20876616 | 1202..1231 | 100 | <- | Minus |
| arm_2L | 20876912..20877083 | 1030..1201 | 100 | <- | Minus |
| arm_2L | 20877149..20877477 | 701..1029 | 100 | <- | Minus |
| arm_2L | 20877553..20877677 | 576..700 | 100 | <- | Minus |
BS32933.pep Sequence
Translation from 16 to 1839
> BS32933.pep
MPYHRGGDASSQADKLSGIVEESDLYEGFAPHVETSEIKTLDFYNLPKQT
GKEPALRSYTEIQQLLQQGKKRDVKNILRENSWPINSPIRAQLWPMLCGQ
HQTKQQMLDGFYWEMVHQVFGTTELSEKPIMLPAFVDATHCLPYHLTSTG
RAVADRIVNVLGYDCPDITYSPVLYPITSILLHFMSEEEAYICLAGLVGS
KEKVFINQTKLQHEVTWKTVMQIAKKHTKSATSYFQRICPGLKLERIFMD
WCWWILAGLPFQHLVRIMDCYFHEGIKVLYRVALVILNLFHKECQSNNEW
SPDNIKNDIGNALIKFCKKIPVSPAKLLHAAFSIRGLSTQYISRIFIKTE
MLLKSRSVLTSGSKQLIKSRSSDNLPTSQSQVNIQMMSHTLTIREKLHSE
SCRNLGEKSPGHRAIAMGVYPIHNLKSQACKNEDLFTLWSWLPVRITMYQ
PVLLYTTEEHGCSLTTFYVRVEQHEPTLLMIKTCNNEVFGAYCSSRWFER
NVKDDKGQRQAYFGTGETFLFSLYPERAKYPWVGIEGDKDLGHSSELFMA
ADSKMITIGGGEGQAIWMDENIRFGKTDSCKTFNNPPLCPSGDFEIRVLE
VYGFVGI*
BS32933.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:02:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| sky-PJ | 607 | CG9339-PJ | 1..607 | 1..607 | 3247 | 100 | Plus |
| sky-PL | 606 | CG9339-PL | 1..606 | 1..607 | 3230 | 99.8 | Plus |
| sky-PK | 597 | CG9339-PK | 1..597 | 1..607 | 3172 | 98.4 | Plus |
| sky-PA | 587 | CG9339-PA | 1..587 | 1..607 | 2999 | 93.9 | Plus |
| sky-PH | 587 | CG9339-PH | 1..587 | 1..607 | 2999 | 93.9 | Plus |
