BS32941.complete Sequence
659 bp assembled on 2014-01-22
GenBank Submission: KX801423
> BS32941.complete
GAAGTTATCAGTCGACATGCACGGATCGGAGCCGACATTGGATTGGGGCA
GCGGCTTCGGCCTGCACATAGCCATCTATTTGGCCCTGGTGTTCTTCTTT
TTCTGCGTACTACCGCTGGCCTGCTACTACATCCGCGTAGAGAGCCAAAC
TCTGGCAAAGATCTGCCAGCCGCGATGTCGACGTCAGCAGAGGATTCCAG
AGCACCATCGTCAGCGATACGGCATTGAAATTGATCGTAATGTATTCAAC
GCACAGGAGGATCCTTCATCGAACCGCTATGGCGACATTTTCTTCATCGA
ACCCGGCAGCGTGGAGGCCAACCGCATTCGCGATCAACTGGAAAAGGATG
AAAAGGATTTACCCAGCTACGACGAGGTGATGCGCATGTGTAACCTGACC
ACTCCCACAGCAGCAGCGGCTGGAATGCCTGTTCCCCAATCGCCCCTCGG
TGTACCCAGTCCCATTGGAATCGCGGCACTGCCGGCGCCACCGTATTCGG
AGACAGATCCACATTCCTCGTCCGCCGCAGAAGCCACTGTCATCGCAATG
GAACCGATGGAGCCATCCACCTCCCGCGCGGCACAGATTCCACCCAGCTC
CGGATCTGGTCCTCCTGCTCCATTGCCAACGACAGCGGTGTGAAAGCTTT
CTAGACCAT
BS32941.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:48:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12963-RF | 627 | CG12963-PF | 1..627 | 17..643 | 3135 | 100 | Plus |
CG12963-RJ | 540 | CG12963-PJ | 129..540 | 232..643 | 2060 | 100 | Plus |
CG12963-RH | 594 | CG12963-PH | 183..594 | 232..643 | 2060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:48:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12963-RF | 1136 | CG12963-RF | 297..924 | 16..643 | 3140 | 100 | Plus |
CG12963-RJ | 782 | CG12963-RJ | 159..570 | 232..643 | 2060 | 100 | Plus |
CG12963-RH | 867 | CG12963-RH | 244..655 | 232..643 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:48:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15561814..15562224 | 233..643 | 2055 | 100 | Plus |
2R | 25286936 | 2R | 15560896..15561113 | 16..233 | 1090 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:48:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3427..3468 | 347..306 | 111 | 73.8 | Minus |
BS32941.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:40 Download gff for
BS32941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12963-RF | 298..923 | 17..642 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:39 Download gff for
BS32941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12963-RF | 298..923 | 17..642 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:39 Download gff for
BS32941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15560897..15561113 | 17..233 | 100 | -> | Plus |
2R | 15561815..15562223 | 234..642 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:40 Download gff for
BS32941.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11448402..11448618 | 17..233 | 100 | -> | Plus |
arm_2R | 11449320..11449728 | 234..642 | 100 | | Plus |
BS32941.pep Sequence
Translation from 16 to 642
> BS32941.pep
MHGSEPTLDWGSGFGLHIAIYLALVFFFFCVLPLACYYIRVESQTLAKIC
QPRCRRQQRIPEHHRQRYGIEIDRNVFNAQEDPSSNRYGDIFFIEPGSVE
ANRIRDQLEKDEKDLPSYDEVMRMCNLTTPTAAAAGMPVPQSPLGVPSPI
GIAALPAPPYSETDPHSSSAAEATVIAMEPMEPSTSRAAQIPPSSGSGPP
APLPTTAV*
BS32941.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12963-PF | 208 | CG12963-PF | 1..208 | 1..208 | 1103 | 100 | Plus |
CG12963-PH | 197 | CG12963-PH | 7..197 | 21..208 | 740 | 77.5 | Plus |
CG12963-PA | 190 | CG12963-PA | 1..190 | 20..208 | 719 | 77 | Plus |
CG12963-PJ | 179 | CG12963-PJ | 2..179 | 13..208 | 718 | 75 | Plus |
CG12963-PC | 178 | CG12963-PC | 37..178 | 67..208 | 712 | 97.2 | Plus |