BS32943.complete Sequence
497 bp assembled on 2014-01-22
GenBank Submission: KX805253
> BS32943.complete
GAAGTTATCAGTCGACATGATCATGATTGCAATCTCAAACTTGGAGCAGT
TAATTTTGTTGTACTGGTTTTCTTTAAGCGACATATCTAACTCTTTCACT
TCTTTGCCAGCCATCCAGTGCAGCTATGAGACCGCCGTCCGTGGAATGGC
ATCGCTGCAGCAGATGCACCGCAGCGGACCGCACATAAAGACGCGTCCGC
CGCGCCAGCCGCTGGATGGAAAGCCCTTCGCCAAGGGCGTTGTCCTGAAG
ACGCTGATAAAGAAGCCCAAGAAGCCGAACTCGGCCAATCGAAAGTGCGT
GCTGGTGCGCCTCTCCACCGGCAAGGAGATGGTGGCCTACATCCCCGGCA
TCGGGCACAACCTGCAAGAGCACAACATTGTACTGTGCCGCGTGGGGCGT
CTGCAGGACGTGCCCGGCGTTAAGCTGAAGGCTGTGCGCGGAGTCTACGA
CTTGGCGCACGTCGTCAAGAAGAGCCAATAGAAGCTTTCTAGACCAT
BS32943.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:48:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tko-RC | 465 | CG7925-PC | 1..465 | 17..481 | 2325 | 100 | Plus |
| tko-RB | 423 | CG7925-PB | 52..423 | 110..481 | 1860 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:48:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tko-RC | 1596 | CG7925-RC | 1083..1547 | 17..481 | 2325 | 100 | Plus |
| tko-RB | 663 | CG7925-RB | 243..614 | 110..481 | 1860 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:48:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2442362..2442826 | 481..17 | 2325 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:48:39 has no hits.
BS32943.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:42 Download gff for
BS32943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tko-RC | 1083..1547 | 17..481 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:43 Download gff for
BS32943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tko-RC | 1083..1547 | 17..481 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:43 Download gff for
BS32943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2442362..2442826 | 17..481 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:42 Download gff for
BS32943.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2336395..2336859 | 17..481 | 100 | | Minus |
BS32943.pep Sequence
Translation from 16 to 480
> BS32943.pep
MIMIAISNLEQLILLYWFSLSDISNSFTSLPAIQCSYETAVRGMASLQQM
HRSGPHIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRLS
TGKEMVAYIPGIGHNLQEHNIVLCRVGRLQDVPGVKLKAVRGVYDLAHVV
KKSQ*
BS32943.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tko-PC | 154 | CG7925-PC | 1..154 | 1..154 | 791 | 100 | Plus |
| tko-PB | 140 | CG7925-PB | 18..140 | 32..154 | 639 | 100 | Plus |
| RpS23-PA | 143 | CG8415-PA | 31..124 | 56..141 | 138 | 39.4 | Plus |
| RpS23-PB | 143 | CG8415-PB | 31..124 | 56..141 | 138 | 39.4 | Plus |
