BS32945.complete Sequence
689 bp assembled on 2014-01-22
GenBank Submission: KX800211
> BS32945.complete
GAAGTTATCAGTCGACATGGCCGCTGAAAGGCAGGAGAAACGAGGCGAGG
AGGAGACGCAGCCCAGGTTGCCCGACCTCGGCTTTGTGCGCGACAAGCTT
CAGAAGTTCCAGTCCAAGATGCTGACCGACTTCGAGCAGCGGCTGTCCTG
CATGGTAGAGGATGTGCTGCAGGATCTGCGACAGCGCGAGTTGCGTGCCC
ACGAGTTCCCCAACTTCGAGAGATCCGATCGGAAGAGCACCTGGCACAAT
CGCGTGACCAGTCAAGCGCCAGCAGACGTCAGCGACTCCACAAATGGCCA
TGCAAATGGCACGCATCCAAGGCCACCGATCCAAAGCGAAACATCCGCTC
GTAAGCAGCGACGACAACTGCCCGAAAAAGTGTTCGTTGCCCGGGAATCG
TACCTCACCGCTCTGCTGCAGGTGGAGCACATGCGCACCATCTACCACAT
CTTTTATATTATTCTGGTCATGTTCCTGCTGAACGTGATCTGCTACGATT
ACTTTGTTGATGGCCGCTTCGATCTGGGACTTGGCACCTTCCGCGGCGGA
CTGCGCCGCCTCCACTGGGTGATGGGCGTTTGGCTGCTGGAGCATGTCTT
CGTCCTGGCGCTCTATTTCGCCTTCCGCGGATGGGCCTTGGTCAGGCACA
AACTGAAACCGCACAGATTGTAAAAGCTTTCTAGACCAT
BS32945.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:48:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8112-RC | 657 | CG8112-PC | 1..657 | 17..673 | 3285 | 100 | Plus |
| CG8112-RB | 1680 | CG8112-PB | 1..650 | 17..666 | 3250 | 100 | Plus |
| CG8112-RD | 669 | CG8112-PD | 1..650 | 17..666 | 3250 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:48:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8112-RC | 1111 | CG8112-RC | 187..846 | 14..673 | 3300 | 100 | Plus |
| Cks85A-RC | 2904 | CG9790-RC | 2039..2691 | 666..14 | 3265 | 100 | Minus |
| CG8112-RB | 1956 | CG8112-RB | 187..839 | 14..666 | 3265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:48:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8713119..8713771 | 14..666 | 3265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:48:42 has no hits.
BS32945.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:43 Download gff for
BS32945.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8112-RC | 190..844 | 17..671 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:44 Download gff for
BS32945.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8112-RC | 190..844 | 17..671 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:44 Download gff for
BS32945.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8713122..8713776 | 17..671 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:43 Download gff for
BS32945.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4538844..4539498 | 17..671 | 99 | | Plus |
BS32945.pep Sequence
Translation from 16 to 672
> BS32945.pep
MAAERQEKRGEEETQPRLPDLGFVRDKLQKFQSKMLTDFEQRLSCMVEDV
LQDLRQRELRAHEFPNFERSDRKSTWHNRVTSQAPADVSDSTNGHANGTH
PRPPIQSETSARKQRRQLPEKVFVARESYLTALLQVEHMRTIYHIFYIIL
VMFLLNVICYDYFVDGRFDLGLGTFRGGLRRLHWVMGVWLLEHVFVLALY
FAFRGWALVRHKLKPHRL*
BS32945.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8112-PC | 218 | CG8112-PC | 1..218 | 1..218 | 1153 | 100 | Plus |
| CG8112-PD | 222 | CG8112-PD | 1..216 | 1..216 | 1144 | 100 | Plus |
| CG8112-PB | 559 | CG8112-PB | 1..216 | 1..216 | 1144 | 100 | Plus |
