BS32950.complete Sequence
314 bp assembled on 2014-01-22
GenBank Submission: KX805198
> BS32950.complete
GAAGTTATCAGTCGACATGGCGGATGTCCTGGAGAAAAGCTCACTGCTGG
ATGCTGTGCCACCACTAGGCGACCCCCACCCACCGCTGCCCCACCAGCAG
CTGCAACAGGAAGCAGCAGCAGCAGCAGCAGCAAATGCCGCACCACCAGC
ACCACCGCAGCAGCAACAACCACCACCCCATCAGCTGCAGCAGCAGCAGC
CGCAACAACAGCAACTGCAACAGAAGCCAGCAAATGCGAGGGCTAATCAG
GATCAAAAAGAATCGTCAGGAAATCAAACTAATTCAGTCCTAGAGTAAAA
GCTTTCTAGACCAT
BS32950.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:48:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tau-RE | 282 | CG45110-PE | 1..282 | 17..298 | 1410 | 100 | Plus |
| tau-RM | 1104 | CG45110-PM | 1..245 | 17..261 | 1225 | 100 | Plus |
| tau-RJ | 927 | CG45110-PJ | 1..245 | 17..261 | 1225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:48:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tau-RE | 1343 | CG45110-RE | 347..628 | 17..298 | 1410 | 100 | Plus |
| tau-RM | 2261 | CG45110-RM | 366..610 | 17..261 | 1225 | 100 | Plus |
| tau-RJ | 2084 | CG45110-RJ | 366..610 | 17..261 | 1225 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:48:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27656206..27656449 | 260..17 | 1220 | 100 | Minus |
| 3R | 32079331 | 3R | 27651569..27651610 | 298..257 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:48:49 has no hits.
BS32950.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:45 Download gff for
BS32950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tau-RE | 347..626 | 17..296 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:48 Download gff for
BS32950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tau-RE | 347..626 | 17..296 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:48 Download gff for
BS32950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27651571..27651606 | 261..296 | 100 | <- | Minus |
| 3R | 27656206..27656449 | 17..260 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:45 Download gff for
BS32950.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23477293..23477328 | 261..296 | 100 | <- | Minus |
| arm_3R | 23481928..23482171 | 17..260 | 100 | | Minus |
BS32950.pep Sequence
Translation from 16 to 297
> BS32950.pep
MADVLEKSSLLDAVPPLGDPHPPLPHQQLQQEAAAAAAANAAPPAPPQQQ
QPPPHQLQQQQPQQQQLQQKPANARANQDQKESSGNQTNSVLE*
BS32950.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tau-PE | 93 | CG45110-PE | 1..93 | 1..93 | 483 | 100 | Plus |
| tau-PH | 288 | CG45110-PH | 1..86 | 1..86 | 431 | 95.3 | Plus |
| tau-PJ | 308 | CG45110-PJ | 1..86 | 1..86 | 431 | 95.3 | Plus |
| tau-PC | 349 | CG45110-PC | 1..86 | 1..86 | 431 | 95.3 | Plus |
| tau-PI | 350 | CG45110-PI | 1..86 | 1..86 | 431 | 95.3 | Plus |
