Clone BS32952 Report

Search the DGRC for BS32952

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:329
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG43406-RA
Protein status:BS32952.pep: full length peptide match
Sequenced Size:326

Clone Sequence Records

BS32952.complete Sequence

326 bp assembled on 2014-01-22

GenBank Submission: KX806012

> BS32952.complete
GAAGTTATCAGTCGACATGATAAATTCTGGCATTTCCCTGTCCACGACAA
ACGTATGCTACACGAACTGCACTTTTGCAACTAATTATGTCCGCTCATTA
TTAACCCCGCTGTCGAGTCAACAAGAGAAGTCATTCTTGACATCCCAGAA
AAGGAAAAGGGAACGGAAAAGCGAGAGGGCAGTGGAAAAAACCAAGCAAA
CATGCTTTTGTCATTTGCGCAAATTAATGCACGACAGTTGGGAAAGAGTA
GGGACGAGGAAAGCGAGGGGCTTACAAAAAGCAGATGCTGCTTATTTGGA
TAGCTCTTAGAAGCTTTCTAGACCAT

BS32952.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 14:48:54 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 14:48:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:48:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 18251419..18251598 17..196 900 100 Plus
2L 23513712 2L 18251651..18251766 195..310 580 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:48:53 has no hits.

BS32952.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:47 Download gff for BS32952.complete
Subject Subject Range Query Range Percent Splice Strand
CG43406-RA 39..332 17..310 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:50 Download gff for BS32952.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18251419..18251598 17..196 100 -> Plus
2L 18251653..18251766 197..310 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:50 Download gff for BS32952.complete
Subject Subject Range Query Range Percent Splice Strand
2L 18251419..18251598 17..196 100 -> Plus
2L 18251653..18251766 197..310 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:47 Download gff for BS32952.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 18251419..18251598 17..196 100 -> Plus
arm_2L 18251653..18251766 197..310 100   Plus

BS32952.pep Sequence

Translation from 16 to 309

> BS32952.pep
MINSGISLSTTNVCYTNCTFATNYVRSLLTPLSSQQEKSFLTSQKRKRER
KSERAVEKTKQTCFCHLRKLMHDSWERVGTRKARGLQKADAAYLDSS*
Sequence BS32952.pep has no blast hits.