BS32953.complete Sequence
1820 bp assembled on 2014-03-03
GenBank Submission: KX805407
> BS32953.complete
GAAGTTATCAGTCGACATGAATCGGTCCGAACCGATTCCCATTCGACGGG
ACCGCTCTTTTGACAGTGTGATCAACCGCCTGCTCCGTATGAGGTCCCAG
AATCATGAGAGCTTTCGCGCCGCCATGTACAATTTCCTGATCGCCGCAGG
AGTTGCGGCATTCGTCGCTGTGTGCTTCATTCTTGGGCCCTTCGTCCGTC
CATTGCTGTGGGCCTTCCTCATGGGCGCCGTGCTCTTTCCATTCAAGCGA
CGTTTGGCGGAGAGCGTAAACAGTTGGTTTCACCGCTTGGAGGTGCGCGA
CTCCAATGTACTGGTTTCGATCTGCCTATCGCCGCTGGAAGCCACAGAGC
ATTGCGGGCGGTTGCTGATCGGGTGGCTCTGCGAACACTGGCAACTCCTC
CTGGCCGGATGCGGAGTGGCCGGGTGCATTAAGCTGCTGGTTTTATATGC
ACCGAAGGGTTTTCTGCTGGCCATCTGGCATTGGATCACCTTTTCCCATG
GCTTGTTCGTTCAAATTATTGGATTCCTCAACGTATACGTGCTCATTTCC
TTGATCGTGGTCTACTTGAGCTGCGTCCACTTCTTTTGGAGGCCAGAGAA
TAGTGCCCACTTCGTGGTCGCCGGACAATCCATGTGGATAGCTGTAGCGG
GCTATCTGAGTAGCTTTCTTGGCGCCCTGCAGGTGCCGGTATTTCTACTG
GTTATGACCTATGTAACAGCATCTACGGCATATCATCTGCAAACCCTAGA
TGATTCGGGATCTTATCTTCACCGCCTGCAAAAGTTGTTCGACAAGAACG
ATTTTGAGCGATCGCTAAGCAACTTCAGCATTTGTGGCAGACCAGGCAAC
GAGCCACTGAGTCCGGGGCTGCAGTCGGATGTGGAGGATGTATCGTTAAG
TGACACTGTCGACTCGACGGACACGTTTGATGTCAAGCCAGAAACGGAGG
TTCCCAGTCACCAGAGCGACACATTCTTTAAGCTCCTTTTTTATGCCTGC
TTGGGCACATTCCTCTATCGCAACGTGTGGATGTTTATCCTAGCGGCAAT
CCCAGTAATTCTGCATCTTATTTACACCGTAGGAGAGTATACGGGAATTA
CTAAATTTGTTTGCAACAAAATTAGCGAAGTTTACGCAGCGCTGCGTTTC
TGGGCAATCGAACACCATTCTGCCGTGCTGCCACTCTGTCTACCTGGTGT
CCTGGAACTAAACTATAAAATCAACACTATCGTGCGGGATTCACTAAAGG
CCTCCGTTGAATCAGTCACCTCCATCCTAATGATCATCCTCATGCTGCTT
ATCATCGTGTTTCTAAGCGTGTTCTTCTGCGTGAACATTTACTCGGAGAC
GATTGAGGTGGCTTACCTGGGCAAGGATTTAATTAACAAGACGATCACAG
ATCGGCCTGAGCTAATTGACATCTTGCCTGCCAACATGCAATCGTCCATC
GAGGATGCTCTTGATAACGCACACCATTATGGTCGCCGTAAGATTGAAAC
CTACATAGACGACTGGCTGGCAGACGCCGATAAGGTGCACGCCACCAAGT
TGAAGGAGCAGATCCTCGAAGTGTGGGACCGGCTCATCCAGTATTGGATC
GATTTCAATAAGGCCGGTTCATCGTACGGGCCGCGGGTACCAACGGATGC
CCTGAAAAGCACATTTGGCGAAATCGTCGACAATCCAGGTAAGCATAAGT
TCCACTCCCTATGGCTTCTTTCAATTTTCTTTCCTCCCGTTTTATTAATA
CATTTTTTGAGTTCTTTTTCGGGGTTTCCGCATGGGTGTCCGGGCTTTCG
TTAAAAGCTTTCTAGACCAT
BS32953.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:04:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2698-RC | 1788 | CG2698-PC | 1..1788 | 17..1804 | 8940 | 100 | Plus |
| CG2698-RE | 2466 | CG2698-PE | 1..1673 | 17..1689 | 8365 | 100 | Plus |
| CG2698-RI | 2421 | CG2698-PI | 1..1672 | 17..1688 | 8360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:04:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2698-RC | 3377 | CG2698-RC | 262..2049 | 17..1804 | 8940 | 100 | Plus |
| CG2698-RE | 3162 | CG2698-RE | 262..1934 | 17..1689 | 8365 | 100 | Plus |
| CG2698-RI | 3147 | CG2698-RI | 262..1933 | 17..1688 | 8360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:04:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8003220..8003876 | 1148..1804 | 3285 | 100 | Plus |
| 3R | 32079331 | 3R | 8002553..8003159 | 541..1147 | 3035 | 100 | Plus |
| 3R | 32079331 | 3R | 8001922..8002458 | 17..553 | 2640 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 15:04:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| G-element | 4346 | G-element DMREPG 4346bp Derived from X06950 (g8427) (Rel. 16, Last updated, Version 1). | 3311..3385 | 1194..1269 | 134 | 65.8 | Plus |
BS32953.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:25:49 Download gff for
BS32953.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2698-RC | 262..2047 | 17..1802 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:30:40 Download gff for
BS32953.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2698-RC | 262..2047 | 17..1802 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:30:40 Download gff for
BS32953.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8001922..8002446 | 17..541 | 100 | -> | Plus |
| 3R | 8002554..8003159 | 542..1147 | 100 | -> | Plus |
| 3R | 8003220..8003874 | 1148..1802 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:25:49 Download gff for
BS32953.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3827644..3828168 | 17..541 | 100 | -> | Plus |
| arm_3R | 3828276..3828881 | 542..1147 | 100 | -> | Plus |
| arm_3R | 3828942..3829596 | 1148..1802 | 100 | | Plus |
BS32953.pep Sequence
Translation from 16 to 1803
> BS32953.pep
MNRSEPIPIRRDRSFDSVINRLLRMRSQNHESFRAAMYNFLIAAGVAAFV
AVCFILGPFVRPLLWAFLMGAVLFPFKRRLAESVNSWFHRLEVRDSNVLV
SICLSPLEATEHCGRLLIGWLCEHWQLLLAGCGVAGCIKLLVLYAPKGFL
LAIWHWITFSHGLFVQIIGFLNVYVLISLIVVYLSCVHFFWRPENSAHFV
VAGQSMWIAVAGYLSSFLGALQVPVFLLVMTYVTASTAYHLQTLDDSGSY
LHRLQKLFDKNDFERSLSNFSICGRPGNEPLSPGLQSDVEDVSLSDTVDS
TDTFDVKPETEVPSHQSDTFFKLLFYACLGTFLYRNVWMFILAAIPVILH
LIYTVGEYTGITKFVCNKISEVYAALRFWAIEHHSAVLPLCLPGVLELNY
KINTIVRDSLKASVESVTSILMIILMLLIIVFLSVFFCVNIYSETIEVAY
LGKDLINKTITDRPELIDILPANMQSSIEDALDNAHHYGRRKIETYIDDW
LADADKVHATKLKEQILEVWDRLIQYWIDFNKAGSSYGPRVPTDALKSTF
GEIVDNPGKHKFHSLWLLSIFFPPVLLIHFLSSFSGFPHGCPGFR*
BS32953.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:02:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2698-PC | 595 | CG2698-PC | 1..595 | 1..595 | 3129 | 100 | Plus |
| CG2698-PE | 821 | CG2698-PE | 1..561 | 1..561 | 2921 | 99.6 | Plus |
| CG2698-PI | 806 | CG2698-PI | 1..557 | 1..557 | 2912 | 100 | Plus |
| CG2698-PH | 865 | CG2698-PH | 1..557 | 1..557 | 2912 | 100 | Plus |
| CG2698-PG | 813 | CG2698-PG | 1..557 | 1..557 | 2912 | 100 | Plus |
