BS32955.complete Sequence
452 bp assembled on 2014-01-22
GenBank Submission: KX803267
> BS32955.complete
GAAGTTATCAGTCGACATGGCAAAACTTCAAGAGGATCCACCTACGGGTG
TCTCGGGTGCTCCAACAGATAATAATATTATGATATGGAATGCTGTGATT
TTTGGTCCACACGACACACCCTTCGAAGACGGAACATTTAAGTTAACCAT
AGAATTTACGGAAGAGTACCCAAACAAACCGCCAACGGTTCGATTTGTAT
CGAAAGTATTTCATCCCAATGTATACGCAGATGGTGGAATATGCTTGGAC
ATATTGCAGAACCGCTGGAGTCCCACGTACGATGTGTCAGCCATATTAAC
ATCCATACAGTCACTGCTGAGCGATCCCAATCCCAACTCACCGGCTAACT
CCACCGCCGCCCAGCTGTATAAAGAAAATCGGCGCGAGTACGAGAAGCGT
GTGAAAGCCTGCGTTGAGCAGAGTTTCATCGATTAGAAGCTTTCTAGACC
AT
BS32955.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:49:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ubc6-RC | 456 | CG2013-PC | 45..456 | 25..436 | 2060 | 100 | Plus |
| Ubc6-RA | 456 | CG2013-PA | 45..456 | 25..436 | 2060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:49:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ubc6-RC | 1142 | CG2013-RC | 231..642 | 25..436 | 2060 | 100 | Plus |
| Ubc6-RA | 2166 | CG2013-RA | 231..642 | 25..436 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4950467..4950752 | 310..25 | 1430 | 100 | Minus |
| 3R | 32079331 | 3R | 4950279..4950407 | 436..308 | 645 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:49:00 has no hits.
BS32955.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:49 Download gff for
BS32955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| UbcD6-RE | 41..460 | 17..436 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:53 Download gff for
BS32955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ubc6-RA | 227..642 | 22..436 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:53 Download gff for
BS32955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4950279..4950404 | 311..436 | 100 | <- | Minus |
| 3R | 4950467..4950757 | 17..310 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:49 Download gff for
BS32955.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 776001..776126 | 311..436 | 100 | <- | Minus |
| arm_3R | 776189..776479 | 17..310 | 98 | | Minus |
BS32955.pep Sequence
Translation from 16 to 435
> BS32955.pep
MAKLQEDPPTGVSGAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEE
YPNKPPTVRFVSKVFHPNVYADGGICLDILQNRWSPTYDVSAILTSIQSL
LSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQSFID*
BS32955.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ubc6-PC | 151 | CG2013-PC | 15..151 | 3..139 | 732 | 99.3 | Plus |
| Ubc6-PA | 151 | CG2013-PA | 15..151 | 3..139 | 732 | 99.3 | Plus |
| eff-PC | 147 | CG7425-PC | 13..136 | 4..127 | 325 | 45.2 | Plus |
| eff-PB | 147 | CG7425-PB | 13..136 | 4..127 | 325 | 45.2 | Plus |
| eff-PA | 147 | CG7425-PA | 13..136 | 4..127 | 325 | 45.2 | Plus |
