BS32966.complete Sequence
605 bp assembled on 2014-01-22
GenBank Submission: KX803797
> BS32966.complete
GAAGTTATCAGTCGACATGATTTCGTTTTGCATTTCATCGCTTTTATCAG
TGTGTATTTTTGCAAACCTTTACAATGGTTGTGCGGCAAAGCCCAACTGG
GAGGCAACGCCATTGTCGATTGGTGGCACCACCACAAATCCCAGTGCCAT
GGACATGAATCTGCGAATTGAGCGCATTTCAAGGTCGGAATTCGGGTTTT
CAGGCACATTCTTCTGGAATATTGATGTGGACGATAGCGTGATGGTCGAG
ATGCGTATTCTGAGCAGTTACTCCGGTGACGAGTCCGATTACAAACTGAC
TCCCATGTCCATTCAACCGCAGAAATTCACCGAATATGTCAATACCTTTT
ACAAGGACCTGTTGTTGCCGAATCTGGGCAATTGCACCGATTTGCCCGTC
TATGAAAATGAATTTGTACCACCCTGGCCCAAGGCGACCTACAATTTCAC
CCGCTGCGCTCTGAACGGCCAAGGATTGCCGGATATTTTGGCAGATGGCT
TCTATAAAGGCGAAGCCGTCATCACCGCCCAGCCAAATCTTGAAGTCACC
GTGTCCGTCGTTCTGCGGATCAGAACGAAAATGTTCTAAAAGCTTTCTAG
ACCAT
BS32966.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:49:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18540-RB | 573 | CG18540-PB | 1..573 | 17..589 | 2865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:49:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18540-RB | 627 | CG18540-RB | 17..590 | 17..590 | 2870 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:49:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18299689..18300035 | 244..590 | 1735 | 100 | Plus |
| 2R | 25286936 | 2R | 18299474..18299630 | 90..246 | 785 | 100 | Plus |
| 2R | 25286936 | 2R | 18299333..18299407 | 17..91 | 375 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:49:19 has no hits.
BS32966.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:59 Download gff for
BS32966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18540-RB | 17..587 | 17..587 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:03 Download gff for
BS32966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18540-RB | 17..587 | 17..587 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:03 Download gff for
BS32966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18299333..18299407 | 17..91 | 100 | -> | Plus |
| 2R | 18299476..18299628 | 92..244 | 100 | -> | Plus |
| 2R | 18299690..18300032 | 245..587 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:59 Download gff for
BS32966.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14186838..14186912 | 17..91 | 100 | -> | Plus |
| arm_2R | 14186981..14187133 | 92..244 | 100 | -> | Plus |
| arm_2R | 14187195..14187537 | 245..587 | 100 | | Plus |
BS32966.pep Sequence
Translation from 16 to 588
> BS32966.pep
MISFCISSLLSVCIFANLYNGCAAKPNWEATPLSIGGTTTNPSAMDMNLR
IERISRSEFGFSGTFFWNIDVDDSVMVEMRILSSYSGDESDYKLTPMSIQ
PQKFTEYVNTFYKDLLLPNLGNCTDLPVYENEFVPPWPKATYNFTRCALN
GQGLPDILADGFYKGEAVITAQPNLEVTVSVVLRIRTKMF*
BS32966.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18540-PB | 190 | CG18540-PB | 1..190 | 1..190 | 1007 | 100 | Plus |
| CG18539-PB | 185 | CG18539-PB | 1..178 | 1..181 | 394 | 42 | Plus |
| CG18536-PA | 191 | CG18536-PA | 16..165 | 12..164 | 376 | 44.4 | Plus |
| CG14502-PD | 188 | CG14502-PD | 22..187 | 22..189 | 337 | 36.3 | Plus |
| CG14502-PC | 188 | CG14502-PC | 22..187 | 22..189 | 337 | 36.3 | Plus |
