BS32967.complete Sequence
602 bp assembled on 2014-01-22
GenBank Submission: KX804285
> BS32967.complete
GAAGTTATCAGTCGACATGGGTGGCGCTGGCGGAAAACTTCTTGGACTGC
TGCTGTGTTTGCTATTTCTAACAGAGTTGCATGGAGTCTTCATGAGGTTC
ACCAATGTAACCTGCGAGAGCAAGGACCTCAGCATGAGTATCGTGGAGTA
CTGTGCGGTTACTACGCTGAGCAAGAATAAAAACAGCATTAGCCTTCGGT
ACGCTATGCTCAAGCCTATGTTTACAAATATAGAGATCTACTTTCAGCTG
ATGACCAGGGGCAGTGAGAGTATCCACGCGGCTTCAAACTGGCAGCCCTT
CCTCCATACGATGAAACTTGATTTGTGTCGATTCTGGAAAAACCACCACA
ACCATTTGGCCAGAATGGTGTTTGAATTCATCGATGGGCACACAAACATG
AACCACACTTGCCCCTATACCAAAGAAAAATACATTTCCATTGATGATTT
GACAAATACCGAAGTCTCCGCCAAGATCCGTGGAGTGCCAATGCCAAAGG
GTTTCTACGCCTTGTTCACCACGTGGTCCACTGAAAACATAACTCGAGTT
GTGACCAACTTTTACTTTGAAGTTATAAGCCCTTGAAAGCTTTCTAGACC
AT
BS32967.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:49:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33914-RC | 570 | CG33914-PC | 1..570 | 17..586 | 2850 | 100 | Plus |
| CG33914-RB | 570 | CG33914-PB | 1..570 | 17..586 | 2850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:49:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33914-RC | 2115 | CG33914-RC | 1382..1951 | 17..586 | 2850 | 100 | Plus |
| CG33914-RB | 961 | CG33914-RB | 228..797 | 17..586 | 2850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:49:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7037158..7037345 | 421..234 | 940 | 100 | Minus |
| 2R | 25286936 | 2R | 7036932..7037096 | 586..422 | 825 | 100 | Minus |
| 2R | 25286936 | 2R | 7037393..7037545 | 235..83 | 765 | 100 | Minus |
| 2R | 25286936 | 2R | 7037603..7037669 | 83..17 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:49:23 has no hits.
BS32967.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:06:01 Download gff for
BS32967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33914-RB | 228..796 | 17..585 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:04 Download gff for
BS32967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33914-RB | 228..796 | 17..585 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:04 Download gff for
BS32967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7036933..7037096 | 422..585 | 100 | <- | Minus |
| 2R | 7037158..7037343 | 236..421 | 100 | <- | Minus |
| 2R | 7037393..7037545 | 83..235 | 100 | <- | Minus |
| 2R | 7037604..7037669 | 17..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:06:01 Download gff for
BS32967.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2924438..2924601 | 422..585 | 100 | <- | Minus |
| arm_2R | 2924663..2924848 | 236..421 | 100 | <- | Minus |
| arm_2R | 2924898..2925050 | 83..235 | 100 | <- | Minus |
| arm_2R | 2925109..2925174 | 17..82 | 100 | | Minus |
BS32967.pep Sequence
Translation from 16 to 585
> BS32967.pep
MGGAGGKLLGLLLCLLFLTELHGVFMRFTNVTCESKDLSMSIVEYCAVTT
LSKNKNSISLRYAMLKPMFTNIEIYFQLMTRGSESIHAASNWQPFLHTMK
LDLCRFWKNHHNHLARMVFEFIDGHTNMNHTCPYTKEKYISIDDLTNTEV
SAKIRGVPMPKGFYALFTTWSTENITRVVTNFYFEVISP*
BS32967.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33914-PC | 189 | CG33914-PC | 1..189 | 1..189 | 1011 | 100 | Plus |
| CG33914-PB | 189 | CG33914-PB | 1..189 | 1..189 | 1011 | 100 | Plus |
| CG33632-PA | 180 | CG33632-PA | 13..177 | 12..184 | 274 | 33.1 | Plus |
| CG33689-PB | 178 | CG33689-PB | 3..173 | 7..186 | 236 | 29.8 | Plus |
| CG33453-PB | 174 | CG33453-PB | 7..171 | 8..187 | 226 | 27.8 | Plus |
