Clone BS32969 Report

Search the DGRC for BS32969

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:329
Well:69
Vector:pDNR-Dual
Associated Gene/TranscriptCG42535-RA
Protein status:BS32969.pep: gold
Sequenced Size:623

Clone Sequence Records

BS32969.complete Sequence

623 bp assembled on 2014-07-07

GenBank Submission: KX803474

> BS32969.complete
GAAGTTATCAGTCGACATGTGGAAAATTAACCTTGTGCCCACAATGGGCA
CCGAAAAGAAAAAACACCCGCCAAAAAAGAAGTCACAGGAGAAAAAAAAG
AGCGGTCATAGCAAGTCGAAGCAGAATTCTTTGAATTCCAATCTGCCCAA
GATATGTTTCGTCATAGCAATTTTCGATCTGCTGCATGCGTTATATTTTA
CAGTTCAAGCAATGATTCTTCTGGTTAAACAGTTCAGCGCGTTTGCTATG
TTGGCGCTTTTGGGTGTCATTTTTTGGGTTATAATGGTCATCCTGTTGAT
GGTTGGCCTTTATAAGCGCAAGCCAGTTTTCGTAAGGTATTGGCTTATAT
TTTCCATAGTCGGCTTTATAACCGATATTCTATTTCTACTTTGGGGCATT
GCGACCTCAATAACTGTGGACTGGGACCGTCTTAATGAGTTTTCAATAAT
TTTCCTTGGAATATTTGTTGAAAGCGCCTGCATATATTTCATACATCGGT
ACTATCAGATTATGGATGAATCGAAAAAGAAGAGGACCCTATGTTGTGGC
GGAAAAAACGAAAAGAAAAAGTCTAAAAGCCCAAAAAAGAAGAAAGGCAA
AAAATAAAAGCTTTCTAGACCAT

BS32969.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:08:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG42535-RA 564 CG42535-PA 1..564 44..607 2820 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:08:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG42535-RA 674 CG42535-RA 16..616 17..615 2910 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:08:31
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 10630703..10630920 232..17 1025 99.1 Minus
3L 28110227 3L 10630353..10630502 464..315 750 100 Minus
3L 28110227 3L 10630558..10630643 316..231 430 100 Minus
3L 28110227 3L 10630213..10630295 547..465 415 100 Minus
Blast to na_te.dros performed on 2014-11-28 15:08:32 has no hits.

BS32969.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-07 10:51:11 Download gff for BS32969.complete
Subject Subject Range Query Range Percent Splice Strand
CG42535-RA 16..599 17..598 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:32:17 Download gff for BS32969.complete
Subject Subject Range Query Range Percent Splice Strand
CG42535-RA 16..599 17..598 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:32:17 Download gff for BS32969.complete
Subject Subject Range Query Range Percent Splice Strand
3L 10630703..10630920 17..232 99   Minus
3L 10630109..10630161 546..598 100 <- Minus
3L 10630215..10630295 465..545 100 <- Minus
3L 10630353..10630500 317..464 100 <- Minus
3L 10630558..10630641 233..316 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-07 10:51:11 Download gff for BS32969.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 10623209..10623261 546..598 100 <- Minus
arm_3L 10623315..10623395 465..545 100 <- Minus
arm_3L 10623453..10623600 317..464 100 <- Minus
arm_3L 10623658..10623741 233..316 100 <- Minus
arm_3L 10623803..10624020 17..232 99   Minus

BS32969.pep Sequence

Translation from 16 to 606

> BS32969.pep
MWKINLVPTMGTEKKKHPPKKKSQEKKKSGHSKSKQNSLNSNLPKICFVI
AIFDLLHALYFTVQAMILLVKQFSAFAMLALLGVIFWVIMVILLMVGLYK
RKPVFVRYWLIFSIVGFITDILFLLWGIATSITVDWDRLNEFSIIFLGIF
VESACIYFIHRYYQIMDESKKKRTLCCGGKNEKKKSKSPKKKKGKK*

BS32969.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:06:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG42535-PA 187 CG42535-PA 1..187 10..196 970 100 Plus
CG42536-PA 184 CG42536-PA 14..136 42..164 247 35.8 Plus
CG14151-PA 196 CG14151-PA 14..152 48..176 224 31.7 Plus
CG34238-PA 206 CG34238-PA 13..128 48..163 186 27.6 Plus