BS32975.complete Sequence
305 bp assembled on 2014-01-22
GenBank Submission: KX801279
> BS32975.complete
GAAGTTATCAGTCGACATGTGTGTGCGTCTCGTTGGATCCGCTCTCTGTT
GCTGTTGCAAATTGGGCCTCAAGTGCCTGTGCATCTTCGCCTGTTCCACG
GTCGGTGTTCTCGCCATAGTTGCCTTGGTCGTTTACTTTTGTTTCTTCCA
CAACAAATCGGAGGACTCGACCACAAAGTCTCTCTCTGATTCTACTATCG
ATAAGTCCTTGAAGGATAGCATAACTACTGCAACGGAAGCCCCTTCACTC
GTCAGAGGATATCTCCAACAAATGATAGAAAGAATCTAAAAGCTTTCTAG
ACCAT
BS32975.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:49:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43233-RA | 273 | CG43233-PA | 1..273 | 17..289 | 1365 | 100 | Plus |
CG43233-RB | 99 | CG43233-PB | 1..99 | 17..119 | 420 | 96.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:49:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43233-RA | 541 | CG43233-RA | 83..357 | 17..291 | 1375 | 100 | Plus |
CG43233-RB | 537 | CG43233-RB | 83..353 | 17..291 | 1280 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:49:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20472977..20473217 | 291..51 | 1205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:49:35 has no hits.
BS32975.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:06:03 Download gff for
BS32975.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43233-RA | 83..353 | 17..287 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:09 Download gff for
BS32975.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43233-RA | 83..353 | 17..287 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:09 Download gff for
BS32975.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20472981..20473216 | 52..287 | 100 | <- | Minus |
2L | 20473269..20473303 | 17..51 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:06:03 Download gff for
BS32975.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20472981..20473216 | 52..287 | 100 | <- | Minus |
arm_2L | 20473269..20473303 | 17..51 | 100 | | Minus |
BS32975.pep Sequence
Translation from 16 to 288
> BS32975.pep
MCVRLVGSALCCCCKLGLKCLCIFACSTVGVLAIVALVVYFCFFHNKSED
STTKSLSDSTIDKSLKDSITTATEAPSLVRGYLQQMIERI*
BS32975.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43233-PA | 90 | CG43233-PA | 1..90 | 1..90 | 467 | 100 | Plus |