BS32981.complete Sequence
449 bp assembled on 2014-01-22
GenBank Submission: KX800431
> BS32981.complete
GAAGTTATCAGTCGACATGATATATCTACAGAGTTGCTGCTGCTGCGTGG
ATCTGCGAATCGGAACCATAGCAATAGGGATTTTGCACATTATAGCGGAT
ATCCTTGGAGGCACATTTGTTGCTTTATTTGGGGAGTCGGGTATTCCCGA
TTTGGGTCACACCCTATTCATTATCTTCGTTATGCTGCACATCCTGAGCT
GCGTTTTCCTGATCATCGGCAGTATACGGTTACGGAGCAGCTGGATGCTC
TTCTACATAATAATGACTATGATCATGGCGGTAGCAATGCTCATATTGAT
AGTATCCGACGTCATACTCGCCGTTTGTTTCTGGGTAATGATCACGTATG
CTATAATGTTCTTTATTTGCCTTTATTCCTGGCTAGTGGCGTACTCTTTT
TACGCCGCCTTAGGAGGACCTCTCTTCATCTGAAAGCTTTCTAGACCAT
BS32981.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:49:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43183-RA | 417 | CG43183-PA | 1..417 | 17..433 | 2085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:49:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43183-RA | 608 | CG43183-RA | 126..544 | 16..434 | 2095 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:49:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8592641..8592774 | 229..362 | 670 | 100 | Plus |
| 2R | 25286936 | 2R | 8592320..8592447 | 16..143 | 640 | 100 | Plus |
| 2R | 25286936 | 2R | 8592495..8592584 | 140..229 | 450 | 100 | Plus |
| 2R | 25286936 | 2R | 8592834..8592905 | 363..434 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:49:46 has no hits.
BS32981.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:06:09 Download gff for
BS32981.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43183-RA | 127..542 | 17..432 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:14 Download gff for
BS32981.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43183-RA | 127..542 | 17..432 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:14 Download gff for
BS32981.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8592496..8592584 | 141..229 | 100 | -> | Plus |
| 2R | 8592642..8592774 | 230..362 | 100 | -> | Plus |
| 2R | 8592834..8592903 | 363..432 | 100 | | Plus |
| 2R | 8592321..8592444 | 17..140 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:06:09 Download gff for
BS32981.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4479826..4479949 | 17..140 | 100 | -> | Plus |
| arm_2R | 4480001..4480089 | 141..229 | 100 | -> | Plus |
| arm_2R | 4480147..4480279 | 230..362 | 100 | -> | Plus |
| arm_2R | 4480339..4480408 | 363..432 | 100 | | Plus |
BS32981.pep Sequence
Translation from 16 to 432
> BS32981.pep
MIYLQSCCCCVDLRIGTIAIGILHIIADILGGTFVALFGESGIPDLGHTL
FIIFVMLHILSCVFLIIGSIRLRSSWMLFYIIMTMIMAVAMLILIVSDVI
LAVCFWVMITYAIMFFICLYSWLVAYSFYAALGGPLFI*
BS32981.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43183-PA | 138 | CG43183-PA | 1..138 | 1..138 | 713 | 100 | Plus |
| CG34230-PA | 129 | CG34230-PA | 1..126 | 1..132 | 148 | 27.4 | Plus |
