Clone BS32983 Report

Search the DGRC for BS32983

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:329
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG43193-RA
Protein status:BS32983.pep: full length peptide match
Sequenced Size:500

Clone Sequence Records

BS32983.complete Sequence

500 bp assembled on 2014-01-22

GenBank Submission: KX805882

> BS32983.complete
GAAGTTATCAGTCGACATGTACGTGCCTCGAACTGCAACGACAGCTGCTC
CTGCCCCAGTTACCCGGAACCAGGATTCTGGATCCTGGATCCAGCGCCCA
GTACCCAGGATTCAGAATCCAGAACCCAGAACCCAGAATCCAGCCTCCAC
TTTGGGACCCTGTGTGCGCATATATATTTATTCCATGTACATATTCTTGC
ACGTCGCAAAAGAGCAGAGGTCCGGGGAAAAGGACACGGGACGCAGGTCT
GAGCACTCCGGACAAAGGGTGACTGCTGCCGTTTATTGTCCTGCTCCTGC
TTCTGCTCCGGCTCCTGCGAATGGCGGAGCACTGGAGCTGTGGAGAAACG
TGGCCGGGCAAGTGACCCAGAAAGTACCAGTAACCAGCAATAAATGGCAA
TATTTGATGGATTACTTGAGCGTTACTTTGACTTGCCAACGAAAAGAAGA
GTATAATTTTATCGTGTTTGTGGGCGGACGTTGAAAGCTTTCTAGACCAT

BS32983.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 14:47:22 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 14:47:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:47:21
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20865386..20865675 196..485 1450 100 Plus
X 23542271 X 20865152..20865331 16..195 900 100 Plus
Blast to na_te.dros performed 2014-11-28 14:47:21
Subject Length Description Subject Range Query Range Score Percent Strand
roo 9092 roo DM_ROO 9092bp 1079..1122 317..274 112 72.7 Minus

BS32983.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:08 Download gff for BS32983.complete
Subject Subject Range Query Range Percent Splice Strand
CG43193-RA 341..807 17..483 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:02 Download gff for BS32983.complete
Subject Subject Range Query Range Percent Splice Strand
X 20865153..20865331 17..195 100 -> Plus
X 20865386..20865673 196..483 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:02 Download gff for BS32983.complete
Subject Subject Range Query Range Percent Splice Strand
X 20865153..20865331 17..195 100 -> Plus
X 20865386..20865673 196..483 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:08 Download gff for BS32983.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20736180..20736358 17..195 100 -> Plus
arm_X 20736413..20736700 196..483 100   Plus

BS32983.pep Sequence

Translation from 16 to 483

> BS32983.pep
MYVPRTATTAAPAPVTRNQDSGSWIQRPVPRIQNPEPRTQNPASTLGPCV
RIYIYSMYIFLHVAKEQRSGEKDTGRRSEHSGQRVTAAVYCPAPASAPAP
ANGGALELWRNVAGQVTQKVPVTSNKWQYLMDYLSVTLTCQRKEEYNFIV
FVGGR*
Sequence BS32983.pep has no blast hits.