BS32983.complete Sequence
500 bp assembled on 2014-01-22
GenBank Submission: KX805882
> BS32983.complete
GAAGTTATCAGTCGACATGTACGTGCCTCGAACTGCAACGACAGCTGCTC
CTGCCCCAGTTACCCGGAACCAGGATTCTGGATCCTGGATCCAGCGCCCA
GTACCCAGGATTCAGAATCCAGAACCCAGAACCCAGAATCCAGCCTCCAC
TTTGGGACCCTGTGTGCGCATATATATTTATTCCATGTACATATTCTTGC
ACGTCGCAAAAGAGCAGAGGTCCGGGGAAAAGGACACGGGACGCAGGTCT
GAGCACTCCGGACAAAGGGTGACTGCTGCCGTTTATTGTCCTGCTCCTGC
TTCTGCTCCGGCTCCTGCGAATGGCGGAGCACTGGAGCTGTGGAGAAACG
TGGCCGGGCAAGTGACCCAGAAAGTACCAGTAACCAGCAATAAATGGCAA
TATTTGATGGATTACTTGAGCGTTACTTTGACTTGCCAACGAAAAGAAGA
GTATAATTTTATCGTGTTTGTGGGCGGACGTTGAAAGCTTTCTAGACCAT
BS32983.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 14:47:22 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 14:47:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:47:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20865386..20865675 | 196..485 | 1450 | 100 | Plus |
X | 23542271 | X | 20865152..20865331 | 16..195 | 900 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:47:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
roo | 9092 | roo DM_ROO 9092bp | 1079..1122 | 317..274 | 112 | 72.7 | Minus |
BS32983.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:08 Download gff for
BS32983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43193-RA | 341..807 | 17..483 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:02 Download gff for
BS32983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20865153..20865331 | 17..195 | 100 | -> | Plus |
X | 20865386..20865673 | 196..483 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:02 Download gff for
BS32983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20865153..20865331 | 17..195 | 100 | -> | Plus |
X | 20865386..20865673 | 196..483 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:08 Download gff for
BS32983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20736180..20736358 | 17..195 | 100 | -> | Plus |
arm_X | 20736413..20736700 | 196..483 | 100 | | Plus |
BS32983.pep Sequence
Translation from 16 to 483
> BS32983.pep
MYVPRTATTAAPAPVTRNQDSGSWIQRPVPRIQNPEPRTQNPASTLGPCV
RIYIYSMYIFLHVAKEQRSGEKDTGRRSEHSGQRVTAAVYCPAPASAPAP
ANGGALELWRNVAGQVTQKVPVTSNKWQYLMDYLSVTLTCQRKEEYNFIV
FVGGR*
Sequence BS32983.pep has no blast hits.