BS32996.complete Sequence
431 bp assembled on 2014-01-22
GenBank Submission: KX802563
> BS32996.complete
GAAGTTATCAGTCGACATGGGGCGGTTGCTGTTTGTTCTTCTGATTTGTT
CCCCAATACTGTCAATTAAATTCCAAGCAAATGCAGAGGATAACTCAACA
AAGAATGGCTTAGATCGAAACAGAGAAGGAGGTAAATCTTATGGAGGTCA
TAAGGCGAATGTACCAGATGTTTCAAGGTTTCAAAGATCATGTTCAACTC
AAGAATGTAAGGAAAAGGAATTCAATGATATCCTCGACTCCATTCTGAGC
TCGGAAACAACTACGGAGCCTGAACGGGAAGAGGCTCCACCGAGGAATGT
TCCACAGAGACCAAATCGACCCTACATGGTTCGACCCAGCAGTAACGGGC
ACTTTCTTCATGACATTGTAACTTGGGTTGAAAGAACAAAGAGGGCAATA
TTTGGATTTGGATAAAAGCTTTCTAGACCAT
BS32996.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:47:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43254-RB | 399 | CG43254-PB | 1..399 | 17..415 | 1995 | 100 | Plus |
| CG43254-RA | 387 | CG43254-PA | 1..387 | 17..415 | 1780 | 97 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:47:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43254-RB | 491 | CG43254-RB | 25..423 | 17..415 | 1995 | 100 | Plus |
| CG43254-RA | 479 | CG43254-RA | 25..411 | 17..415 | 1780 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:47:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7739033..7739246 | 415..202 | 1070 | 100 | Minus |
| 3R | 32079331 | 3R | 7739412..7739539 | 144..17 | 640 | 100 | Minus |
| 3R | 32079331 | 3R | 7739296..7739356 | 203..143 | 305 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:47:40 has no hits.
BS32996.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:05:19 Download gff for
BS32996.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43254-RB | 25..421 | 17..413 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:23:12 Download gff for
BS32996.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43254-RB | 25..421 | 17..413 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:23:12 Download gff for
BS32996.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7739035..7739244 | 204..413 | 100 | <- | Minus |
| 3R | 7739296..7739355 | 144..203 | 100 | <- | Minus |
| 3R | 7739413..7739539 | 17..143 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:05:19 Download gff for
BS32996.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3564757..3564966 | 204..413 | 100 | <- | Minus |
| arm_3R | 3565018..3565077 | 144..203 | 100 | <- | Minus |
| arm_3R | 3565135..3565261 | 17..143 | 100 | | Minus |
BS32996.pep Sequence
Translation from 16 to 414
> BS32996.pep
MGRLLFVLLICSPILSIKFQANAEDNSTKNGLDRNREGGKSYGGHKANVP
DVSRFQRSCSTQECKEKEFNDILDSILSSETTTEPEREEAPPRNVPQRPN
RPYMVRPSSNGHFLHDIVTWVERTKRAIFGFG*
BS32996.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:52:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43254-PB | 132 | CG43254-PB | 1..132 | 1..132 | 700 | 100 | Plus |
| CG43254-PA | 128 | CG43254-PA | 1..128 | 1..132 | 663 | 97 | Plus |
