BS33014.complete Sequence
788 bp assembled on 2014-01-22
GenBank Submission: KX805412
> BS33014.complete
GAAGTTATCAGTCGACATGTTTCCGCAGATATGGGGTGTGATTTTTTTGT
TCACTCCTACTGTTTTTAGTGAACTCTTTAAGGATCCGGAGCTGCTTGCC
GGATTTTATCAGGGGGACATAAAAGCTCATCCAATTCGTACTCGAAACGG
AATTGTCAATCAGATTTATCACTGGCCCAATCGCACTGTACCATATATGA
TTGAAGATGATGCATTTGCCGACAGTCATTATCGGGAAATTCTTAGAGCC
ATTTCCATCATAGAGGAAAACTCATGCGTTATTTTCAAGCCAGCTACTGA
AATGGATTTTCCCATGGCGCTCGTCATTACGTCAAAAGGTTTGGGCTGCA
ATACCGTTCACTTGGGCTATAGGAATAAGACACAAGTGGTAAATCTGGAG
ATTTACCCACTTGGCGAAGGCTGCTTTCGCATCGGTTCCATTATCCACGA
GCTCCTTCACGTTTTGGGCTTCGAACATCAGCATGTGTCCCAAAATCGGG
ACCAATACGTCAGCATCCAGTGGAAAAATATAAATCCGCAGTACAATATC
AATTTCGTGAACAACGATAATTCTACAGCGTGGCACGACTTTGACGAAGG
CTACGATTATGAAAGTGTTATGCACTATGTGCCAAGGGCCTTTTCCAGGA
ATGGCCAACCCACAATTGTGCCCCTCCGCGAAGGAGCCGAAAATATGGGG
CAACGATTTTATATGAGCGAAAAGGATATTCGCAAGTTGAACAAAATGTA
TAGATGCCCTGATCATGTTTAGAAGCTTTCTAGACCAT
BS33014.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:50:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Semp1-RA | 756 | CG11864-PA | 1..756 | 17..772 | 3765 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:50:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Semp1-RA | 789 | CG11864-RA | 9..765 | 16..772 | 3770 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:50:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15612518..15613072 | 772..218 | 2760 | 99.8 | Minus |
| 2L | 23513712 | 2L | 15613125..15613327 | 218..16 | 1015 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:50:04 has no hits.
BS33014.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:06:19 Download gff for
BS33014.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11864-RA | 16..765 | 23..772 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:20 Download gff for
BS33014.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Semp1-RA | 16..765 | 23..772 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:20 Download gff for
BS33014.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15612518..15613071 | 219..772 | 99 | <- | Minus |
| 2L | 15613125..15613320 | 23..218 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:06:19 Download gff for
BS33014.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15612518..15613071 | 219..772 | 99 | <- | Minus |
| arm_2L | 15613125..15613320 | 23..218 | 100 | | Minus |
BS33014.pep Sequence
Translation from 16 to 771
> BS33014.pep
MFPQIWGVIFLFTPTVFSELFKDPELLAGFYQGDIKAHPIRTRNGIVNQI
YHWPNRTVPYMIEDDAFADSHYREILRAISIIEENSCVIFKPATEMDFPM
ALVITSKGLGCNTVHLGYRNKTQVVNLEIYPLGEGCFRIGSIIHELLHVL
GFEHQHVSQNRDQYVSIQWKNINPQYNINFVNNDNSTAWHDFDEGYDYES
VMHYVPRAFSRNGQPTIVPLREGAENMGQRFYMSEKDIRKLNKMYRCPDH
V*
BS33014.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Semp1-PA | 251 | CG11864-PA | 1..251 | 1..251 | 1367 | 100 | Plus |
| CG15254-PB | 254 | CG15254-PB | 10..254 | 8..251 | 551 | 48.4 | Plus |
| CG15254-PA | 254 | CG15254-PA | 10..254 | 8..251 | 551 | 48.4 | Plus |
| CG15255-PB | 261 | CG15255-PB | 28..258 | 23..248 | 468 | 43.6 | Plus |
| CG15255-PA | 261 | CG15255-PA | 28..258 | 23..248 | 468 | 43.6 | Plus |
