BS33019.complete Sequence
767 bp assembled on 2014-07-18
GenBank Submission: KX802401
> BS33019.complete
GAAGTTATCAGTCGACATGAAAGGAAACAGACAGAAGACCTTCGTCGTGG
AGGATTCCGAATCGCAGAAGCCCGAAAAGAATCCGAGTCCTGAGCGCAAG
GAGGATCGCAAGGAGCGCAGGAGGGAGGAGGAAATGGAACGCAAGCGGGA
ACTGGAGCGGCGAAAGGAACTCGCGAGGGAAAAGGAACGAGAGAAAAAGC
AGCATCAGCAGGAGTGGCGCAAGGAACTGGAGAAGGAACGTCAGCGTGAA
AAGGAATTGCAGCGTGAACATCTGAGGAAGGAGCCATCCACTTCCTCCAA
AAGGGTAAATCCAGAAATCACTAAATTCGACGAGGAATTCGAGCAGGATA
TTCAGAAGTTGGAGCAAAGTATTTGCCAACTGGACTTTCGCTCCAAAACG
ATGGCCACCATGTGGATGGACAAGCTGCGCCAACCACCACAAAATGCAGA
CGAGGCCAGATCTAGGAACATAATAACATCCCATCTGCTCAAGTGCTGTG
GCGATAACATATTCAATAAGGAGCCATTCAATCATCCTCCGCCACCACAA
AATTTGACAACCATAAGGGAGATGATGTTCTTAACGCGCGATAGTACGTG
CCACGGAATGCCCATTTCCAAGCAGATGGAACCCAACGCCAATCTAACCC
AATTATTTAGCGATTCATACGATGGTGGCGAGTTCCTGAGAAAGCTACCA
GTGCCACGTGATGGGGCATTCTTTATCTATTACATGCAACCAAATTTGTA
GAAGCTTTCTAGACCAT
BS33019.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:14:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14154-RB | 735 | CG14154-PB | 1..735 | 17..751 | 3600 | 99.3 | Plus |
| CG14154-RA | 750 | CG14154-PA | 23..750 | 24..751 | 3565 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14154-RB | 952 | CG14154-RB | 83..823 | 14..754 | 3630 | 99.3 | Plus |
| CG14154-RA | 1019 | CG14154-RA | 160..890 | 24..754 | 3580 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10642048..10642601 | 24..577 | 2710 | 99.3 | Plus |
| 3L | 28110227 | 3L | 10642703..10642880 | 577..754 | 875 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 15:14:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2301..2426 | 131..256 | 117 | 54.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6799..6944 | 124..269 | 109 | 52.7 | Plus |
BS33019.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-18 11:09:26 Download gff for
BS33019.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14154-RB | 86..820 | 17..751 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:34:24 Download gff for
BS33019.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14154-RB | 86..820 | 17..751 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:34:24 Download gff for
BS33019.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10642704..10642877 | 578..751 | 99 | | Plus |
| 3L | 10642048..10642601 | 24..577 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-18 11:09:26 Download gff for
BS33019.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10635148..10635701 | 24..577 | 99 | -> | Plus |
| arm_3L | 10635804..10635977 | 578..751 | 99 | | Plus |
BS33019.pep Sequence
Translation from 16 to 750
> BS33019.pep
MKGNRQKTFVVEDSESQKPEKNPSPERKEDRKERRREEEMERKRELERRK
ELAREKEREKKQHQQEWRKELEKERQREKELQREHLRKEPSTSSKRVNPE
ITKFDEEFEQDIQKLEQSICQLDFRSKTMATMWMDKLRQPPQNADEARSR
NIITSHLLKCCGDNIFNKEPFNHPPPPQNLTTIREMMFLTRDSTCHGMPI
SKQMEPNANLTQLFSDSYDGGEFLRKLPVPRDGAFFIYYMQPNL*
BS33019.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:10:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14154-PB | 244 | CG14154-PB | 1..244 | 1..244 | 1294 | 100 | Plus |
| CG14154-PA | 249 | CG14154-PA | 9..249 | 4..244 | 1278 | 100 | Plus |
| CG2839-PA | 826 | CG2839-PA | 277..425 | 4..150 | 163 | 33.3 | Plus |
| CG2839-PA | 826 | CG2839-PA | 624..753 | 12..131 | 159 | 33.8 | Plus |
| CG2839-PA | 826 | CG2839-PA | 342..476 | 5..150 | 158 | 30.1 | Plus |
| CG2839-PA | 826 | CG2839-PA | 467..617 | 2..150 | 150 | 27.6 | Plus |
| CG2839-PA | 826 | CG2839-PA | 594..736 | 13..150 | 149 | 28.3 | Plus |
