Clone BS33025 Report

Search the DGRC for BS33025

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:330
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG13733-RA
Protein status:BS33025.pep: gold
Sequenced Size:890

Clone Sequence Records

BS33025.complete Sequence

890 bp assembled on 2014-01-22

GenBank Submission: KX800963

> BS33025.complete
GAAGTTATCAGTCGACATGCCATACCACGATCGAGCCAAAGCCCGATTGG
AGAACGAGGTGGTTCTGCTGCGGAGCGAGGTGTCCTCGCTGCGATCCAAG
CACAACCAACATCGTAAGTATCGGCAGGAGCAGGTGGTTCTGCAGGCGCG
TATGGAACAGGAGATCCAGCTTCTACAGAGCGAACTAGCCGCAGCTCAAT
CGAATCGGAATGAGCGGGAGTGCGGTGGAGCCGAGCAGTGTTCAGTGTTG
AGCCAGCAGCTGGAGAAACTTGACGAGCACGTGGCTAAGCAGGAGAAGTA
CATTGCCTTCCTGGAGGAGCAGATCAATCTCACACGTAACAAGTACCAGC
AACGTATGACCGAAGTCCGGCAGAATGCCGAACTGGTGGAAAAGGAGATG
AAGCGGGTGCGCCGCGAGATGAAGACCATTGCCGAGCAGGCTGGGGAAGT
GGACAGCCTCAAGAACCAAGTCGGTTTCCTCACCGCCAAGCTGGAGCGCC
GGAACGCCATCATCTCCAGGTACGAAGCCCAGCAGGAGGAAATGATAAGT
ATCATGGCAAGTCTCCAGAAGAAGAAAGTTAAAAAAACGCGCCATCAGAA
GATTCACAACAACCATGACGATAAAGCTGATGTCAGATCGATCCCTTCCG
AACAGCTACCAATGCCCAAGCCGAGTGATCAAATAAAGCATCGCAAGAAA
CGGAAATTTGGCGAAGGCGATAAGGAAGATTCCAGCTCGGCGGGCTCTGA
TAAGCCACCAAGTTTTGAGGCGAATCCCAGGTCTTCAAAAATCCGATCCC
ATAACTTGGACTGCCTCTCCTCTGCGCTGAAAAATAAGTTAAGTAACCAG
CAACAGTCAACTGTCGAGGGATGAAAGCTTTCTAGACCAT

BS33025.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:50:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG13733-RA 858 CG13733-PA 1..858 17..874 4245 99.7 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:50:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG13733-RA 1132 CG13733-RA 121..978 17..874 4245 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:50:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17477949..17478806 874..17 4245 99.7 Minus
Blast to na_te.dros performed on 2014-11-28 14:50:11 has no hits.

BS33025.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:06:22 Download gff for BS33025.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 121..977 17..873 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:24 Download gff for BS33025.complete
Subject Subject Range Query Range Percent Splice Strand
CG13733-RA 121..977 17..873 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:24 Download gff for BS33025.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17477950..17478806 17..873 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:06:22 Download gff for BS33025.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17471050..17471906 17..873 99   Minus

BS33025.pep Sequence

Translation from 16 to 873

> BS33025.pep
MPYHDRAKARLENEVVLLRSEVSSLRSKHNQHRKYRQEQVVLQARMEQEI
QLLQSELAAAQSNRNERECGGAEQCSVLSQQLEKLDEHVAKQEKYIAFLE
EQINLTRNKYQQRMTEVRQNAELVEKEMKRVRREMKTIAEQAGEVDSLKN
QVGFLTAKLERRNAIISRYEAQQEEMISIMASLQKKKVKKTRHQKIHNNH
DDKADVRSIPSEQLPMPKPSDQIKHRKKRKFGEGDKEDSSSAGSDKPPSF
EANPRSSKIRSHNLDCLSSALKNKLSNQQQSTVEG*

BS33025.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG13733-PA 285 CG13733-PA 1..285 1..285 1431 100 Plus