BS33026.complete Sequence
1652 bp assembled on 2014-03-03
GenBank Submission: KX802661
> BS33026.complete
GAAGTTATCAGTCGACATGACGGTCCTGTTGAGCCACAGGATGCTCCTCG
CTGGATGGGCGAGGCGTGCCACGCCCACCGCCGCCCAGTGGATACACCAC
AATCCAGAAAAGATGACGCTGCTCGAGATGCTGGGCACCACCAATCTACG
CAAGAGCACCCCCAAGGACTACCGAATCCTGCGCGAGATCTTCAACTCCT
TCGAACGATACTCCGGAGTCGGCAACGACATTCAATTGACCTTGCCAGAG
CGCGCTGCCAACGAGCTGATCATGTGCGAAAAGAAGCGGGAGTACGAGAA
GGGCATCATGGATCCATCGAAGTTCGCGCCGGGACACCACATCTTCCAGG
TGCTCACCAAGGTGAAGAAGTCGCCGCTCTTCCAGATCCTGCGACGGATG
CCCAAGGGTGCGGCCCTCAAGGCGCACGACACCTCCATGTGCAGTTCGAG
GGTGGTGATCGAGATAACCTATCGGGATAACCTGTGGGTATGTACCACAC
AAAACGGCTGCCGTGTGGAGGAGTTCCGATTCGCAAAGGATAAGCCCAAG
GACGTCAGTTTCGAGAATGGCGAGTGGCAGCCCATGGAAAAGCTCAGAGA
ATTGCGCGGCGAGGAGAATCTTAGAAAGTATTTACAAATGCGATTCAGCA
TGTACCCTTTGGCCAGCTTTACGACCAATGCCCACGCCTGGCGCCACATG
ATGGGCATCTTTGGCCTGCTGGACGGTCTACTACAGTACGCCCCCGTTTG
GGGCGACTACTACTACAATGCGCTAAAGGAATTCTACGCCGACGGAGTGC
AATATTTGGAGGTAAGATCTGTGCTCCCGCAGCTCTACTCCCTGGATGGT
AGCCGGATGCCCAAGCGGGAAACTGTGCAAATCTACAAGGACACACTGGA
GCGATTCAAGAAGGAGCATCCAGGATTCATCGATTCCAAACTGATATACG
CGCCCATTCGGCATGTGCAACCAGAATTAGTGGGAGAATACATTAAGGAG
TGCACAGAACTGAATAAAGAGTTTCCCAGCTTCGTGGTTGGCTTCGATTT
GGTGGGTCAGGAGGACGTGGGTCATCCGCTGAGCAATTTCGCAGCGGAGC
TACTCAAGCTGCCCGACCACATCCACTTTTACTTCCACGCCGGCCAAACC
AACTGGTATGGATCACATGTGGACCAGAATCTGTTGGATGCCATTGTGCT
GGGCACAAAGAGGATCGGTCATGGCTACACGATCACAAAGCACCCGGTGC
TCATGCGGCTGGCCAAGTACCTGAACATCGCGCTGGAGGTGTGTCCGGTG
TCCAACCAGGTGCTCCAACTGGGATCCGACTACCGCAGTCATCCGGCTGC
CACGCTGATCGCCGAGAATGTGCCCATGGTGATCGCCTCCGGCAGTCCGG
GCTTCTGGCGAGCCGCTCCTCTGTCCCATGACTTCTACATGGCCTTTCTG
GGCATTGCACCCATGAATGCCGATCTGAAGTTTCTCAAGCGAACCGCCAA
GAACTCCATTAAGTACAGCTCGCTAAAGGACGAGGCCAAGGCCGAGGCCA
TGGAGAAGTGGAAAAAGCAATGGGATAAGTGGGTCGAGAATATAGTCAGA
CAAAGGAAAAAGGATTCAGAGACTGAAAAGAAATAAAAGCTTTCTAGACC
AT
BS33026.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:06:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adgf-E-RA | 1620 | CG10143-PA | 1..1620 | 17..1636 | 7965 | 99.4 | Plus |
| Adgf-B-RA | 1563 | CG5998-PA | 955..1436 | 1007..1488 | 475 | 73.2 | Plus |
| Adgf-A-RB | 1662 | CG5992-PB | 1150..1244 | 1130..1224 | 205 | 81.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:06:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adgf-E-RA | 1791 | CG10143-RA | 91..1711 | 17..1637 | 7970 | 99.4 | Plus |
| Adgf-B-RA | 1694 | CG5998-RA | 1050..1531 | 1007..1488 | 475 | 73.2 | Plus |
| Adgf-A-RB | 2584 | CG5992-RB | 1350..1444 | 1130..1224 | 205 | 81.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:06:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14657667..14658665 | 1015..17 | 4980 | 99.9 | Minus |
| 2R | 25286936 | 2R | 14656878..14657499 | 1637..1016 | 2990 | 98.7 | Minus |
| 3L | 28110227 | 3L | 17752871..17752965 | 1224..1130 | 205 | 81.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:06:38 has no hits.
BS33026.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:26:33 Download gff for
BS33026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adgf-E-RA | 91..1699 | 17..1625 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:31:32 Download gff for
BS33026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adgf-E-RA | 91..1699 | 17..1625 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:31:32 Download gff for
BS33026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14656890..14657499 | 1016..1625 | 98 | <- | Minus |
| 2R | 14657667..14658665 | 17..1015 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:26:33 Download gff for
BS33026.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10544395..10545004 | 1016..1625 | 98 | <- | Minus |
| arm_2R | 10545172..10546170 | 17..1015 | 99 | | Minus |
BS33026.pep Sequence
Translation from 16 to 1635
> BS33026.pep
MTVLLSHRMLLAGWARRATPTAAQWIHHNPEKMTLLEMLGTTNLRKSTPK
DYRILREIFNSFERYSGVGNDIQLTLPERAANELIMCEKKREYEKGIMDP
SKFAPGHHIFQVLTKVKKSPLFQILRRMPKGAALKAHDTSMCSSRVVIEI
TYRDNLWVCTTQNGCRVEEFRFAKDKPKDVSFENGEWQPMEKLRELRGEE
NLRKYLQMRFSMYPLASFTTNAHAWRHMMGIFGLLDGLLQYAPVWGDYYY
NALKEFYADGVQYLEVRSVLPQLYSLDGSRMPKRETVQIYKDTLERFKKE
HPGFIDSKLIYAPIRHVQPELVGEYIKECTELNKEFPSFVVGFDLVGQED
VGHPLSNFAAELLKLPDHIHFYFHAGQTNWYGSHVDQNLLDAIVLGTKRI
GHGYTITKHPVLMRLAKYLNIALEVCPVSNQVLQLGSDYRSHPAATLIAE
NVPMVIASGSPGFWRAAPLSHDFYMAFLGIAPMNADLKFLKRTAKNSIKY
SSLKDEAKAEAMEKWKKQWDKWVENIVRQRKKDSETEKK*
BS33026.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:04:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adgf-E-PA | 539 | CG10143-PA | 1..539 | 1..539 | 2863 | 100 | Plus |
| Adgf-B-PA | 520 | CG5998-PA | 31..518 | 43..530 | 1619 | 59.2 | Plus |
| Adgf-A-PB | 553 | CG5992-PB | 60..538 | 46..526 | 1327 | 49.7 | Plus |
| Adgf-A-PA | 553 | CG5992-PA | 60..538 | 46..526 | 1327 | 49.7 | Plus |
| Adgf-D-PA | 502 | CG9621-PA | 21..501 | 46..530 | 825 | 37.5 | Plus |
