BS33035.complete Sequence
1265 bp assembled on 2014-01-22
GenBank Submission: KX801263
> BS33035.complete
GAAGTTATCAGTCGACATGGAGAAAAAAAACAAATGTTGTAAGCACTTTA
AGGACCATGGGGCGCAGAAACCATCACAACTCAATGAGCACAAGGAGCAT
AAATTAAGGGACCATTACCGCAAGGAACGAATGAAGTCTTCAGAGAATGT
GCAAAAGTCCTACAAACATAATTATACGACAAATCAAAATCAGATACGGC
AGGACTATTATTGCGATCATTCGTGGGAGGATCGTGAGTCTCCTTCTAAC
CATGAAGACCATGCTCAGTATTTGTTTTCCAAAAAATGTTTCAATGTTAA
TTATCACCCGGCACAAAATGAGAAGTGGAAACACCAGTCGAAATTAAAGG
TGATGATGCAACCCAGTTCAAATTACACACCCAAGCAAGCAATTGTTCCA
GCATATCTCCTTAATGATAGAAAAAGGCAGAAACCAGTCATAGAACACAG
CTGTGGGGACTACCTTCTCTATAAGAATCAAAACTATGAAGCGGACCCAT
CTAGTAAAAGTGAGCAGTGTGAGGTCGAGGGTGGTTATAATAACATAACC
CCACATCGTTTAAACCACCACCAGAAGCAAAAGAAAGACTCTGATTTACT
TAATGCAGCTAAGGCTCATTGCCAGGCTGCTGCCGAAAGATTCCAGAATA
AGTTTCCTTCATGCAGTAAGTGTTCCTCCTCCAACGAATCCCAATCGAAA
CCATCCAGAATAACCGTGATCAGTGCGAAAAGCGGAGACGATCTCAGAGC
GGCTGTTCGGTCCCAAATAGAGGTCCAAGAGGCCTTGAATGCGTTTACAC
TTGAAGTGAAGGATAAGAGGGAGGAAGTACCATCCGAAGAAGAACGCAGT
ACCAAGCCCAAAAAGAGCAAACAAATTACGTCTCATACGCAAGCCGAGAA
AGTGGATCCCACTGCCGAATGCGCCCAATTAGATACCCTAGGGGTTGACG
ATTTAGAACTCGTGGATCTAAGTGGCAGTCCTAGTGATGCCGCTATTACC
AATGTGGATGTAAGTGACAGTCCTGGTGATGCAGCTATTACCAAAATGGA
TCTAAGAGACAGTCCTACTGATGCAGATATTAACAAAGTAATTGATCCGG
TTATCAGGAACATTCAGCGCATGTATCTGAACACTCTGAAAGACGAAATG
TCCCTCATGGAGTATCTAGTTACGGTCCCGGAATTAATTAAAAAAGCTTT
TAAGCGTCCACTCGCGGAAAAAGAGCAAAAAATAACAAGGGAGTGTTGAA
AGCTTTCTAGACCAT
BS33035.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:50:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31752-RB | 1233 | CG31752-PB | 1..1233 | 17..1249 | 6150 | 99.9 | Plus |
| CG31752-RB | 1233 | CG31752-PB | 946..1029 | 1004..1087 | 240 | 85.7 | Plus |
| CG31752-RB | 1233 | CG31752-PB | 988..1071 | 962..1045 | 240 | 85.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:50:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31752-RB | 1566 | CG31752-RB | 33..1269 | 17..1253 | 6170 | 99.9 | Plus |
| CG31752-RB | 1566 | CG31752-RB | 978..1061 | 1004..1087 | 240 | 85.7 | Plus |
| CG31752-RB | 1566 | CG31752-RB | 1020..1103 | 962..1045 | 240 | 85.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:50:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18839925..18840856 | 1253..322 | 4645 | 99.9 | Minus |
| 2L | 23513712 | 2L | 18840914..18841162 | 325..77 | 1245 | 100 | Minus |
| 2L | 23513712 | 2L | 18841219..18841278 | 76..17 | 300 | 100 | Minus |
| 2L | 23513712 | 2L | 18840091..18840174 | 1045..962 | 240 | 85.7 | Minus |
| 2L | 23513712 | 2L | 18840133..18840216 | 1087..1004 | 240 | 85.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:50:07 has no hits.
BS33035.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:06:20 Download gff for
BS33035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31752-RB | 33..1264 | 17..1248 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:22 Download gff for
BS33035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31752-RB | 33..1264 | 17..1248 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:22 Download gff for
BS33035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18840914..18841162 | 77..325 | 100 | <- | Minus |
| 2L | 18841219..18841278 | 17..76 | 100 | | Minus |
| 2L | 18839930..18840852 | 326..1248 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:06:20 Download gff for
BS33035.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18839930..18840852 | 326..1248 | 99 | <- | Minus |
| arm_2L | 18840914..18841162 | 77..325 | 100 | <- | Minus |
| arm_2L | 18841219..18841278 | 17..76 | 100 | | Minus |
BS33035.pep Sequence
Translation from 16 to 1248
> BS33035.pep
MEKKNKCCKHFKDHGAQKPSQLNEHKEHKLRDHYRKERMKSSENVQKSYK
HNYTTNQNQIRQDYYCDHSWEDRESPSNHEDHAQYLFSKKCFNVNYHPAQ
NEKWKHQSKLKVMMQPSSNYTPKQAIVPAYLLNDRKRQKPVIEHSCGDYL
LYKNQNYEADPSSKSEQCEVEGGYNNITPHRLNHHQKQKKDSDLLNAAKA
HCQAAAERFQNKFPSCSKCSSSNESQSKPSRITVISAKSGDDLRAAVRSQ
IEVQEALNAFTLEVKDKREEVPSEEERSTKPKKSKQITSHTQAEKVDPTA
ECAQLDTLGVDDLELVDLSGSPSDAAITNVDVSDSPGDAAITKMDLRDSP
TDADINKVIDPVIRNIQRMYLNTLKDEMSLMEYLVTVPELIKKAFKRPLA
EKEQKITREC*
BS33035.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31752-PB | 410 | CG31752-PB | 1..410 | 1..410 | 2169 | 100 | Plus |
