BS33057.complete Sequence
296 bp assembled on 2014-01-22
GenBank Submission: KX803688
> BS33057.complete
GAAGTTATCAGTCGACATGACATCACGGACGCGCCACTGTGCCCGACTGG
GGATCGTTCTCCTTGGGATCTGTTGCATCGCCAGCGGAATTTACCTCTTC
CGCAACTGGATCGATATGTTTACACGCATGCGCGGCCAGACCTTTGGGTT
AAGTTTCGCAAGCCGGCAAATTGGCAATGTGTGCAGAGGTCAACTGGGAG
ACTCATTTGCATACCACTTGGATTGGGAGGCAACAATTTTTTCCATTGAT
TTAAAGCAAAGACGAACGCAAAGACACTGAAAGCTTTCTAGACCAT
BS33057.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:50:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pes-RE | 264 | CG7228-PE | 1..264 | 17..280 | 1320 | 100 | Plus |
pes-RF | 1668 | CG7228-PF | 1..123 | 17..139 | 615 | 100 | Plus |
pes-RH | 1668 | CG7228-PH | 1..123 | 17..139 | 615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:50:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pes-RE | 519 | CG7228-RE | 101..366 | 17..282 | 1330 | 100 | Plus |
pes-RF | 2532 | CG7228-RF | 101..223 | 17..139 | 615 | 100 | Plus |
pes-RH | 2653 | CG7228-RH | 222..344 | 17..139 | 615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:50:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7991117..7991262 | 282..137 | 730 | 100 | Minus |
2L | 23513712 | 2L | 7991358..7991480 | 139..17 | 615 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:50:25 has no hits.
BS33057.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:06:26 Download gff for
BS33057.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pes-RE | 101..363 | 17..279 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:27 Download gff for
BS33057.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pes-RE | 101..363 | 17..279 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:27 Download gff for
BS33057.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7991120..7991259 | 140..279 | 100 | <- | Minus |
2L | 7991358..7991480 | 17..139 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:06:26 Download gff for
BS33057.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7991358..7991480 | 17..139 | 100 | | Minus |
arm_2L | 7991120..7991259 | 140..279 | 100 | <- | Minus |
BS33057.pep Sequence
Translation from 16 to 279
> BS33057.pep
MTSRTRHCARLGIVLLGICCIASGIYLFRNWIDMFTRMRGQTFGLSFASR
QIGNVCRGQLGDSFAYHLDWEATIFSIDLKQRRTQRH*
BS33057.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pes-PE | 87 | CG7228-PE | 1..87 | 1..87 | 467 | 100 | Plus |
pes-PF | 555 | CG7228-PF | 1..50 | 1..50 | 232 | 90 | Plus |
pes-PH | 555 | CG7228-PH | 1..50 | 1..50 | 232 | 90 | Plus |
pes-PG | 555 | CG7228-PG | 1..50 | 1..50 | 232 | 90 | Plus |
pes-PD | 555 | CG7228-PD | 1..50 | 1..50 | 232 | 90 | Plus |