Clone BS33062 Report

Search the DGRC for BS33062

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:330
Well:62
Vector:pDNR-Dual
Associated Gene/TranscriptCG43167-RA
Protein status:BS33062.pep: gold
Sequenced Size:413

Clone Sequence Records

BS33062.complete Sequence

413 bp assembled on 2014-01-22

GenBank Submission: KX804820

> BS33062.complete
GAAGTTATCAGTCGACATGGATTCGATTATTGAAAAGCTCAAGCGCTTTA
TTTCCGTGGCGTTTCTGTTTAATAAGCTGTTATTTTACGTATTCATTTCT
GGTCTGTTTATCTTAATTTTTATTCGACTTTTCATGATGGAGCGCCTTCA
ACGATTGAAGGCAATAATCTGGAGAAGCTTTTCCGAATATGACCACGAAT
CTGAGCCAGAAGATGAAGGATACATAGATGATGAGTTTCTATTCAGGGAC
CTCAATCCGGAGCAGAGTGTCGAGTTGCATCGCCGGCAGCGATTGGAGGC
GGCAGCTAAAGTATTGCGAAATGTGGCGGACAAGGAGGGATCTCACAAGT
GCCCCGAACCGAGACGAAAGAAAACTGAACCAACAAAATCAAGATAAAAG
CTTTCTAGACCAT

BS33062.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:50:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG43167-RA 381 CG43167-PA 1..381 17..397 1905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:50:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG43167-RA 583 CG43167-RA 60..441 17..398 1910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:50:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11657469..11657850 17..398 1910 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:50:33 has no hits.

BS33062.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:06:30 Download gff for BS33062.complete
Subject Subject Range Query Range Percent Splice Strand
CG43167-RA 60..438 17..395 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:29 Download gff for BS33062.complete
Subject Subject Range Query Range Percent Splice Strand
CG43167-RA 60..438 17..395 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:29 Download gff for BS33062.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11657469..11657847 17..395 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:06:30 Download gff for BS33062.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11657469..11657847 17..395 100   Plus

BS33062.pep Sequence

Translation from 16 to 396

> BS33062.pep
MDSIIEKLKRFISVAFLFNKLLFYVFISGLFILIFIRLFMMERLQRLKAI
IWRSFSEYDHESEPEDEGYIDDEFLFRDLNPEQSVELHRRQRLEAAAKVL
RNVADKEGSHKCPEPRRKKTEPTKSR*

BS33062.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:53:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG43167-PA 126 CG43167-PA 1..126 1..126 645 100 Plus