BS33103.complete Sequence
1655 bp assembled on 2014-03-03
GenBank Submission: KX802939
> BS33103.complete
GAAGTTATCAGTCGACATGGAGTCCAGCAGCAGTGTCGTCGCGGAGATGG
AGTCCACCAGTCCAAGTGATCACGGCCAGCCCACCCAGATCACCTCCATC
GATGGCTTCTTCAATCGGAAACGGGGGCGTCCGCCAAAGAATCGCTTTGT
GGAGGTCTACAAGAGCGCCCAGCACTCGCCGCAGGCCATCTTCACCAGCT
TTAAGCTGGAGAGAAGCGAATATTCCGGCCCAGGAGCACGTCTTCCCGGT
GGCTCATCGTCAACGGTGGCCACTGCAGAGGATCGTTTGTCTCTAGCGGA
TCACGATGGATCAGCAACTGATCTCACACCTAGTCGCTACCGGAAACGGG
GTCGTGTTTGGGCCCCAACATCGTCTTTGGAGCAGCCTAGCAAGAGAATT
GTCAATCAGCCAACCCACTTTGGAGCGAGAAGTGAGACAGAGTCTCGGAG
TAGCCGCCATGAGTCTTTAGCCCAGCCCACCTTACAGCCCTCAGAGCCTT
TAGAAACAAACTCGTCGACGAATTTATCAAGCACAATTTTGGATAAAGTT
TCAGTTGTTCGAGCGGCGGGAACTTTTTATCCGGAGAATGCGAATTCAGC
TGCCCAAGGGGAAACGCCGGAAGTGGTTAGTTCGAGATACAATAGTCGCC
AGGAGTCGAACGACTTGGAGGTGGACCAGCCGGAGGATCTGAGCATGCGA
CCATCTCTGCCGGAAGCCACTGCCACACCGGCGGTAGTGGGACCAGCTCT
GAATATGAATCTGTTGCAGTTTAAGCAGCTGATCGATTTGTACCAGCGAC
AGGTGCTGTTGCCCAGCTTTCTGGCGGCAGCCAGTCAACCGTTGGCATTA
CCGGGTTCAGCAGCAGGTCCTGGAGTTTCAGGGCCTCTTCTGGACATGCG
CATTTTGCTTGAGAATGCCGCTCAACAGAAGCTAATGCTGCTCAATGCAG
CCGCAAGTGCAACGGCAAGTGCAGTGGCAGCCACAACAATCAACTCCGGT
CAAAGGACTGCGGCGAAACGTAACCGGGATCACGACATTCCGAGTGGCTA
TCTAAAATTCCGCTTCAACGAGGACTGTGGATTCGAGAGATGTGGCTACC
GGAATCACCAGTCGCACTTCCACTGCAACCGGCGAGATTGCCACTATAGT
TTCTGCGACAAGACCCGCTTTGTGCAACATACGGCGCGTCATGAGCGAAT
GGACACGTTGATGGGTGATGATTTTCGCCAATTCCGAGCCAACATGCAAT
GCGGAGTGGCCAGCTGCGGTTATGCCACTGCAAGTGGTGCAGCCACGGAG
ACGAATCACCTAAGCAGGATAGATCCCACAGAGGCGGTAACGGCATCCTC
GCGGAAAACTTCGCACTTTCACTGCCGCAAGTGTGATTATGTGTGCACGG
ATTCGAACAAGGTGGTGGCCCATCGAAGATTGCATCTTCGCCAGGACTAT
GTGCGGAATGCTGGCTTCCGCAAGGTGGGCGGAAACGAGCAGTGCGATTC
TCCCGGCTGCTCCTACGCCCAACGGCACACCCACTACCATTGCGTCACCT
GCGACGGCGGAGTCCTTTCACGAGCACAACTGGCAGCCCACAAACACCGG
ACAGGCTTTCCCAAACAGGAGGCGGATACCACACCCTAGAAGCTTTCTAG
ACCAT
BS33103.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:04:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7512-RB | 1623 | CG7512-PB | 1..1623 | 17..1639 | 8115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:04:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7512-RB | 1958 | CG7512-RB | 194..1819 | 16..1641 | 8130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11517607..11518376 | 553..1322 | 3850 | 100 | Plus |
| 3L | 28110227 | 3L | 11518445..11518765 | 1321..1641 | 1605 | 100 | Plus |
| 3L | 28110227 | 3L | 11517095..11517403 | 167..475 | 1545 | 100 | Plus |
| 3L | 28110227 | 3L | 11514863..11515014 | 16..167 | 760 | 100 | Plus |
| 3L | 28110227 | 3L | 11517471..11517552 | 473..554 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:04:21 has no hits.
BS33103.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:25:52 Download gff for
BS33103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7512-RB | 195..1817 | 17..1639 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:30:43 Download gff for
BS33103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7512-RB | 195..1817 | 17..1639 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:30:43 Download gff for
BS33103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11518447..11518763 | 1323..1639 | 100 | | Plus |
| 3L | 11514864..11515013 | 17..166 | 100 | -> | Plus |
| 3L | 11517095..11517403 | 167..475 | 100 | -> | Plus |
| 3L | 11517474..11517552 | 476..554 | 100 | -> | Plus |
| 3L | 11517609..11518376 | 555..1322 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:25:52 Download gff for
BS33103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11507964..11508113 | 17..166 | 100 | -> | Plus |
| arm_3L | 11510195..11510503 | 167..475 | 100 | -> | Plus |
| arm_3L | 11510574..11510652 | 476..554 | 100 | -> | Plus |
| arm_3L | 11510709..11511476 | 555..1322 | 100 | -> | Plus |
| arm_3L | 11511547..11511863 | 1323..1639 | 100 | | Plus |
BS33103.pep Sequence
Translation from 16 to 1638
> BS33103.pep
MESSSSVVAEMESTSPSDHGQPTQITSIDGFFNRKRGRPPKNRFVEVYKS
AQHSPQAIFTSFKLERSEYSGPGARLPGGSSSTVATAEDRLSLADHDGSA
TDLTPSRYRKRGRVWAPTSSLEQPSKRIVNQPTHFGARSETESRSSRHES
LAQPTLQPSEPLETNSSTNLSSTILDKVSVVRAAGTFYPENANSAAQGET
PEVVSSRYNSRQESNDLEVDQPEDLSMRPSLPEATATPAVVGPALNMNLL
QFKQLIDLYQRQVLLPSFLAAASQPLALPGSAAGPGVSGPLLDMRILLEN
AAQQKLMLLNAAASATASAVAATTINSGQRTAAKRNRDHDIPSGYLKFRF
NEDCGFERCGYRNHQSHFHCNRRDCHYSFCDKTRFVQHTARHERMDTLMG
DDFRQFRANMQCGVASCGYATASGAATETNHLSRIDPTEAVTASSRKTSH
FHCRKCDYVCTDSNKVVAHRRLHLRQDYVRNAGFRKVGGNEQCDSPGCSY
AQRHTHYHCVTCDGGVLSRAQLAAHKHRTGFPKQEADTTP*
BS33103.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:02:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7512-PB | 540 | CG7512-PB | 1..540 | 1..540 | 2830 | 100 | Plus |
| cas-PC | 691 | CG2102-PC | 301..477 | 335..528 | 203 | 25.1 | Plus |
| cas-PA | 793 | CG2102-PA | 403..579 | 335..528 | 203 | 25.1 | Plus |
