BS33111.complete Sequence
1220 bp assembled on 2014-01-22
GenBank Submission: KX803770
> BS33111.complete
GAAGTTATCAGTCGACATGGCGTTATCAGTCGAAATTGAAAGGGTAATGG
ACCAGGGCAACTGCCTGATGCCCGACATCAATATCTGCCAAAGCGACTTG
GCCAATCCCACCGAGCCCATTGTCACCAAGATCATGGTGCACTATCTGCG
GAGTTTCGGCTTTCGCCTGGAGCCGCCCTATAAAATTGGCACCGAACTCG
GTCACTCGTCGCGGGAGGCGCGCGTCTTTCTCATCCGAGTGTGCCGCCAA
GTGGAGCGCATCGTCCAGATCAGCTTTCCCAACAAGACCTACACCTATAT
GGACATAATTAAACCAGCTGTTAAAAAAACGCTCGCCACTCTGAGCTACC
TTTTTAACCACCTGGCCTACTACAAGGTGTTCAAAAAGAAGGTGCTGGGA
CCTGTAGAGGAGGCCATTAAGCTAAAGGATTCGCTGACCGCCGAGGTGAA
GGCCAAAAGTCAACAGCTGGAGCAATGCAGTCAGAAGACGAAGGATTGCG
AAGTGGCCATAAACAAACTCAAGAAAGATTTGCAGGATACTCAAGCAAAG
CTTCTACCTTTGAAGAAGTCCTGTAGCGAGCATGAAAACACTCTGGAACT
CATTGAGCAGCAGCAGGGTGAGCTGGACAAACGCATCGGTCACTGGGAAC
AGCTAGTGGTGGAGGACAGTCAAGTGACAGAGCTGCGAGAGAAAATTAAG
AGCGCATCGTCGCATGTCGAGAGCTGCAAGACGGAGCTGGCCAGTAAAAA
ACAGGTGACGAATGAACATCGCCGGATGATCGAAAACAGTCAACATATAG
CCACCGCTTTGGAGAAGGCCACGGCTGTGCTTTCGCTGTGCAAGGTGGAT
GATTACAAAGAGAGCTTCAAGCAGCTGGAGGCAGTGGAAAAGCAGTTGCC
CACCTGTAAAGTTAATTATCAGAAGCTCCTTCAGGATGCAGAGGCCAAGA
AACAGGAACTCGCTCTTTGTGCACATCGGTACGAGGAAAGAAACCAGGAA
AACGATGCCGAGAATCACAAGGTGCAAAATGAACTCAAAAAGCTGCAGGT
CGATGTTGAGGATCGCAAGAAACGTCTGGAGGATCTGAATAATCACTTGA
TCGAGCTAGACCAGCAAAATTTGGAGCAAGATCAGCTATATGCCATATTA
AATGAGCAAATCCATGAGGTTCTCGGACAAAACTGGCAGATGAATTCCAC
TTAAAAGCTTTCTAGACCAT
BS33111.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:50:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nuf2-RA | 1188 | CG8902-PA | 1..1188 | 17..1204 | 5820 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:50:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nuf2-RA | 1290 | CG8902-RA | 73..1260 | 17..1204 | 5820 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7064461..7064974 | 1204..691 | 2555 | 99.8 | Minus |
| 2L | 23513712 | 2L | 7065031..7065406 | 691..316 | 1820 | 98.9 | Minus |
| 2L | 23513712 | 2L | 7065465..7065765 | 317..17 | 1460 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:50:57 has no hits.
BS33111.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:26:20 Download gff for
BS33111.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nuf2-RA | 73..1258 | 17..1202 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:39 Download gff for
BS33111.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nuf2-RA | 73..1258 | 17..1202 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:39 Download gff for
BS33111.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7064463..7064974 | 691..1202 | 99 | <- | Minus |
| 2L | 7065032..7065404 | 318..690 | 98 | <- | Minus |
| 2L | 7065465..7065765 | 17..317 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:26:20 Download gff for
BS33111.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7064463..7064974 | 691..1202 | 99 | <- | Minus |
| arm_2L | 7065032..7065404 | 318..690 | 98 | <- | Minus |
| arm_2L | 7065465..7065765 | 17..317 | 99 | | Minus |
BS33111.pep Sequence
Translation from 16 to 1203
> BS33111.pep
MALSVEIERVMDQGNCLMPDINICQSDLANPTEPIVTKIMVHYLRSFGFR
LEPPYKIGTELGHSSREARVFLIRVCRQVERIVQISFPNKTYTYMDIIKP
AVKKTLATLSYLFNHLAYYKVFKKKVLGPVEEAIKLKDSLTAEVKAKSQQ
LEQCSQKTKDCEVAINKLKKDLQDTQAKLLPLKKSCSEHENTLELIEQQQ
GELDKRIGHWEQLVVEDSQVTELREKIKSASSHVESCKTELASKKQVTNE
HRRMIENSQHIATALEKATAVLSLCKVDDYKESFKQLEAVEKQLPTCKVN
YQKLLQDAEAKKQELALCAHRYEERNQENDAENHKVQNELKKLQVDVEDR
KKRLEDLNNHLIELDQQNLEQDQLYAILNEQIHEVLGQNWQMNST*
BS33111.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nuf2-PA | 395 | CG8902-PA | 1..395 | 1..395 | 2020 | 100 | Plus |
