BS33114.complete Sequence
893 bp assembled on 2014-01-22
GenBank Submission: KX801886
> BS33114.complete
GAAGTTATCAGTCGACATGAAAGATGAGGAGTTCGCACAGGGCTTGGAAC
AATTCGCTCTTTGTCTGCACGACCATTTGTGCCGGGCAAGTGCTGGCCTA
AACATCATCTACTCCCCATTATCCATCCACATCTCTGCGGCCATGCTGCG
GATGGGAACATCCGAGGGATCGGCTACAGCTAAGGAGATGGACGAGGGGC
TCCGTTTCGGTGGGCTAGAAGCTCAGCAAGTAGCTGAAAGCTTTGGTGTC
GTCCTCAAGTCCTATGAACAGTGCCAGGTTCTTAAAATGGCAAACGGCCT
ATATGTTATGAAGGGTCTCCAAGTTGACGAGCAGTTTGGTCACATACTAG
AGCAGAAGTTTCGCTCCAAGCCAATGGAGATTGACTTTGGCAGCGAGCAG
GCTGCCAGCATAATCAACAAATGGGTGGAGTCACAGACCAACAACCTGAT
CAAGGACATAATCGGTCCAAGAGTTCTTACCAAGGACTCGCGGCTGTGCC
TAGTAAACGGTATTCACTTCAAGGGTGAGTGGTCAATCAGTTTCAATGAA
AAAGAAACCCGCGAAGAGGATTTCTTCGGATCGGATAGACCTACCAGAGT
GAGAATGATGCATGTGTGCGAGAACTTCTTTTTTGCCGTACTTCCCATGT
TCGAAGCCACTGCCCTTAGAATGAATTATAGTGCCTGTAATTTGGCCATG
ATCATTTTACTTCCTGATGAGAAGTCGAATCTCACGAGCCTCGAAAAGAA
ACTTAGTGATATTTCCCTAGAGGTAGTGTCATCAGCAATGAATCTGGAAA
AAGTGGATGTGAAGATTCCTAGCTTTACAGCCGAGTTCCAGCAAGAACTA
TCCCAGGTTTTAATGCTGGTTAGCTGAAAGCTTTCTAGACCAT
BS33114.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:51:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn42Db-RD | 861 | CG9454-PD | 1..861 | 17..877 | 4305 | 100 | Plus |
| Spn42Db-RC | 1167 | CG9454-PC | 1..852 | 17..868 | 4260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:51:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn42Db-RD | 1486 | CG9454-RD | 55..918 | 16..879 | 4320 | 100 | Plus |
| Spn42Db-RC | 1255 | CG9454-RC | 55..907 | 16..868 | 4265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:51:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 6879853..6880716 | 879..16 | 4320 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:51:31 has no hits.
BS33114.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:26:34 Download gff for
BS33114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn42Db-RD | 56..915 | 17..876 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:56 Download gff for
BS33114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn42Db-RD | 56..915 | 17..876 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:56 Download gff for
BS33114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 6879856..6880715 | 17..876 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:26:34 Download gff for
BS33114.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 2767361..2768220 | 17..876 | 100 | | Minus |
BS33114.pep Sequence
Translation from 16 to 876
> BS33114.pep
MKDEEFAQGLEQFALCLHDHLCRASAGLNIIYSPLSIHISAAMLRMGTSE
GSATAKEMDEGLRFGGLEAQQVAESFGVVLKSYEQCQVLKMANGLYVMKG
LQVDEQFGHILEQKFRSKPMEIDFGSEQAASIINKWVESQTNNLIKDIIG
PRVLTKDSRLCLVNGIHFKGEWSISFNEKETREEDFFGSDRPTRVRMMHV
CENFFFAVLPMFEATALRMNYSACNLAMIILLPDEKSNLTSLEKKLSDIS
LEVVSSAMNLEKVDVKIPSFTAEFQQELSQVLMLVS*
BS33114.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn42Db-PD | 286 | CG9454-PD | 1..286 | 1..286 | 1451 | 100 | Plus |
| Spn42Db-PC | 388 | CG9454-PC | 1..285 | 1..285 | 1444 | 99.6 | Plus |
| Spn42Da-PJ | 374 | CG9453-PJ | 7..284 | 4..281 | 530 | 40.7 | Plus |
| Spn42Da-PL | 379 | CG9453-PL | 7..284 | 4..281 | 530 | 40.7 | Plus |
| Spn42Da-PK | 379 | CG9453-PK | 7..284 | 4..281 | 530 | 40.7 | Plus |
