BS33116.complete Sequence
992 bp assembled on 2014-01-22
GenBank Submission: KX805512
> BS33116.complete
GAAGTTATCAGTCGACATGATGGCCAGAAAGCGAGCACTGGATTCCCAAC
TGCCGCTCCTTGCGCTGGGTGGCCTAATCATTATGGGATTGGCCATAGTC
GATTCCCTGGAGTGTTATGCCTGCGACTCCGCCGAAGATTCGGAGTGTGC
CACCCGACCGGGTCAGCAGCTGGAAGTGGAGGAGTGTCAGCAGACGGGCG
ACGAGTGTGTCACCTCCATATCGGCGGGATTAACGCGACGCGGCTGCCTG
GCGCGGCTGTATCCTAATGGCTATTGTGCCGCTCCATGCGACCGGTGCAA
TACGAGCCTGTGCAATCGGCACGTTTATCCTGCGGATCGATTGCGGTGCT
ATCAGTGCAGCGGATCGGATTGCATCGATGTGGCCAGTCGGCCGCAATAC
CTGCTGCCGTGTCCGGTTTACCAGGAGGATGACAGGTGCTACACGAACGT
AGTCCACTTATCCAACACCCTGCGCGGCTGTGAGCACACCAATTTGCCGA
CAACCTGTCCGCACGTCTGCCTTAAGTGCAATTATAATGGTTGCAATGCG
GAGAAGACCGTCACGGAATTGCGCTGCCTTCAGTGCACCCATAATCGATT
GGCCCCCAATCCGGACTGCCTGCGGGACCAGGATCCACCGGCGGCGGTGG
CGGAGGACCAGCCCAAGTGCTCGTTGAGCAACTCAACTGTGACGCACTGC
GTCAACAAGGTGATGTACGGGCACAGGGAGAACTGCTTTAGCTACCGCAA
CACCCAGACGGAGGTCCTTCAGAGGGGCTGCTCCACCGCCATGGGATTCT
ATCCCACCGGCGAGCTAACCGAGTGCCACGGCGAATTCTGCAATGCCGAT
TGCCAGGACATTGTCTGCGCCGCGTGCAACTCCACCGCGAATCCTGGCTG
CCGTGCTGGCCGCAATTTACCAACGGAAAAGTGCGCAGCAGGCACCACGG
CCTGCTATTCCTGCGAGCAAGGTTAGAAGCTTTCTAGACCAT
BS33116.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:51:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15773-RB | 960 | CG15773-PB | 1..960 | 17..976 | 4800 | 100 | Plus |
| CG15773-RA | 1437 | CG15773-PA | 1..955 | 17..971 | 4775 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:51:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15773-RB | 1085 | CG15773-RB | 21..980 | 17..976 | 4800 | 100 | Plus |
| CG15773-RA | 1676 | CG15773-RA | 21..975 | 17..971 | 4775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:51:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5732760..5733719 | 17..976 | 4800 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:51:39 has no hits.
BS33116.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:26:38 Download gff for
BS33116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15773-RB | 13..972 | 17..976 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:59 Download gff for
BS33116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15773-RB | 21..980 | 17..976 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:59 Download gff for
BS33116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5732760..5733719 | 17..976 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:26:38 Download gff for
BS33116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5626793..5627752 | 17..976 | 100 | | Plus |
BS33116.pep Sequence
Translation from 16 to 975
> BS33116.pep
MMARKRALDSQLPLLALGGLIIMGLAIVDSLECYACDSAEDSECATRPGQ
QLEVEECQQTGDECVTSISAGLTRRGCLARLYPNGYCAAPCDRCNTSLCN
RHVYPADRLRCYQCSGSDCIDVASRPQYLLPCPVYQEDDRCYTNVVHLSN
TLRGCEHTNLPTTCPHVCLKCNYNGCNAEKTVTELRCLQCTHNRLAPNPD
CLRDQDPPAAVAEDQPKCSLSNSTVTHCVNKVMYGHRENCFSYRNTQTEV
LQRGCSTAMGFYPTGELTECHGEFCNADCQDIVCAACNSTANPGCRAGRN
LPTEKCAAGTTACYSCEQG*
BS33116.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15773-PB | 319 | CG15773-PB | 1..319 | 1..319 | 1789 | 100 | Plus |
| CG15773-PA | 478 | CG15773-PA | 1..318 | 1..318 | 1783 | 100 | Plus |
| CG15170-PB | 560 | CG15170-PB | 32..309 | 33..317 | 312 | 33.3 | Plus |
| CG15170-PA | 561 | CG15170-PA | 33..310 | 33..317 | 312 | 33.3 | Plus |
| CG13492-PD | 2979 | CG13492-PD | 1534..1806 | 29..295 | 239 | 30.2 | Plus |
