Clone BS33119 Report

Search the DGRC for BS33119

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:331
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG43329-RA
Protein status:BS33119.pep: full length peptide match
Sequenced Size:617

Clone Sequence Records

BS33119.complete Sequence

617 bp assembled on 2014-01-22

GenBank Submission: KX805874

> BS33119.complete
GAAGTTATCAGTCGACATGCGCTTATACTTGACCTTTTTTGGAATATCAA
TAGTTTTTTTGGCGACCTTGCTTCAAATTCTTGCCATACACAGCACTGGG
AATTGCACCTTCGCAAAGAATGTCACTCTAAAGTTCGTGTGCAAGGGAAA
TGTCCCCAAGGATATGTATACAATGTTTCGGGACAACCGAGCTCCTCCCG
ACACTCCCTACAGTGTTTGGCAGACCGAAGAGGACGACTCTGCTCTTCTG
GTATCGTTTTACACCACGATGTTTCCAAACTATGATACCATCAATCTGCA
GGAAGGCGAGATGGATCTTGGCCAATTCTTTCTAGCCACCAAGGGAAGAA
ATACCAACGATCTTTTGTTTGTGACACCGTCTACCCTCCACTGCTTCCCC
TTCGGTCTGCGCTATACGAATGAGCTAAAAAGGCACTGTCTGGGCCAAGA
CATAAGTGAGGGAGGTGTCCTTACCAAGAAGCCCATTATTCACTACGGCT
CGCTTAGCATAAAAACCCCCGACTTGCCGAAGAGTGATGCAACTTCGACA
AGTGTGAAAAGAAACCTGCTTCTTGTCGTGTGTGCGGTGATCACTTACTA
AAAGCTTTCTAGACCAT

BS33119.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG43329-RA 585 CG43329-PA 1..585 17..601 2925 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG43329-RA 732 CG43329-RA 41..627 17..603 2935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:51:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22504592..22505178 603..17 2935 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:51:43 has no hits.

BS33119.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:26:40 Download gff for BS33119.complete
Subject Subject Range Query Range Percent Splice Strand
CG43329-RA 41..623 17..599 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:02 Download gff for BS33119.complete
Subject Subject Range Query Range Percent Splice Strand
CG43329-RA 41..623 17..599 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:02 Download gff for BS33119.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22504596..22505178 17..599 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:26:40 Download gff for BS33119.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22497696..22498278 17..599 100   Minus

BS33119.pep Sequence

Translation from 16 to 600

> BS33119.pep
MRLYLTFFGISIVFLATLLQILAIHSTGNCTFAKNVTLKFVCKGNVPKDM
YTMFRDNRAPPDTPYSVWQTEEDDSALLVSFYTTMFPNYDTINLQEGEMD
LGQFFLATKGRNTNDLLFVTPSTLHCFPFGLRYTNELKRHCLGQDISEGG
VLTKKPIIHYGSLSIKTPDLPKSDATSTSVKRNLLLVVCAVITY*

BS33119.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG43329-PA 194 CG43329-PA 1..194 1..194 1023 100 Plus