Clone BS33125 Report

Search the DGRC for BS33125

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:331
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG15394-RC
Protein status:BS33125.pep: gold
Sequenced Size:512

Clone Sequence Records

BS33125.complete Sequence

512 bp assembled on 2014-01-22

GenBank Submission: KX805388

> BS33125.complete
GAAGTTATCAGTCGACATGAGGAAAATGCAAATATTGGGATTTCTGTTCA
TGTGGGCTCTTATTTGCCTTGGCAGTTGTTTCGCCTATCCCAGGGCAAAG
ACCTCGTACGTAAATGACTTTGTATTCCCCACCGAAGATGAGCAAGTCAT
TCGCCCCTGGCAGCAGTACTCAAATGAACACTCATCGCAGTCCAGAGACT
TGAAACTGGCCAAATGCACTGACTTCCAGCTGGACAACGCTTCTGGCAAT
GCTCGTCTGATCTTCATCAGCTACAAGAAAGTGGATGATCCTCTACAGAG
CCTAAAAAAGGCACTACTTGAGGAGCTGAATCTTCCGGAACTTGTGGTCA
GCCTAAAAGTGGTGAGGAGTGGGAAAAACCGCTTAGTTTTTGAGCTGCCA
AGTGCTCTGGATGCCCTCTTCACTCTGAATAGTTTCTGCAATCGGTATCG
CGATCGTCACGATCTCACCTATGAAATCATCAGCGTTCAGAAGTGAAAGC
TTTCTAGACCAT

BS33125.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG15394-RD 480 CG15394-PD 1..480 17..496 2400 100 Plus
CG15394-RC 480 CG15394-PC 1..480 17..496 2400 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:52:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG15394-RD 785 CG15394-RD 231..710 17..496 2400 100 Plus
CG15394-RC 587 CG15394-RC 33..512 17..496 2400 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2592289..2592698 87..496 2050 100 Plus
2L 23513712 2L 2592160..2592229 17..86 350 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:51:59 has no hits.

BS33125.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:26:46 Download gff for BS33125.complete
Subject Subject Range Query Range Percent Splice Strand
CG15394-RC 33..511 17..495 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:07 Download gff for BS33125.complete
Subject Subject Range Query Range Percent Splice Strand
CG15394-RC 33..511 17..495 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:07 Download gff for BS33125.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2592160..2592229 17..86 100 -> Plus
2L 2592289..2592697 87..495 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:26:46 Download gff for BS33125.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2592160..2592229 17..86 100 -> Plus
arm_2L 2592289..2592697 87..495 100   Plus

BS33125.pep Sequence

Translation from 16 to 495

> BS33125.pep
MRKMQILGFLFMWALICLGSCFAYPRAKTSYVNDFVFPTEDEQVIRPWQQ
YSNEHSSQSRDLKLAKCTDFQLDNASGNARLIFISYKKVDDPLQSLKKAL
LEELNLPELVVSLKVVRSGKNRLVFELPSALDALFTLNSFCNRYRDRHDL
TYEIISVQK*

BS33125.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG15394-PD 159 CG15394-PD 1..159 1..159 823 100 Plus
CG15394-PC 159 CG15394-PC 1..159 1..159 823 100 Plus