Clone BS33129 Report

Search the DGRC for BS33129

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:331
Well:29
Vector:pDNR-Dual
Associated Gene/Transcriptdia-RC
Protein status:BS33129.pep: full length peptide match
Sequenced Size:425

Clone Sequence Records

BS33129.complete Sequence

425 bp assembled on 2014-01-22

GenBank Submission: KX800416

> BS33129.complete
GAAGTTATCAGTCGACATGCGCCTCAAAAAGCTGGGAATGTCTCGTCACG
AGAAAACGAAATCCACGGGCGGCGGGCTCCTGGACAGTCTGTTCGGAAGA
CCCTCGAAGTCCAAGGGAGGAACCATCAGCAGTGGCACCCTGGCCCATGG
CGGACGACCCGTGTCCGCGGACAACTATGTGGTGCCGGGCGTGGAGGACT
TTGAGCAGTACATCCAGCAGCTAAGCGTTGCGGAGCTGGATGCGAAGTTT
CTGGAGATCATCGAGGACATGAACATTCCGAAGGACAAGAGGGAGCCCCT
GTTGGCCAAATCGAAGGAGGAGCGACAGAAGATGATTATGTGGCACTTGA
AAGGTAAAGAACATGGTGCAAGTACACGTTTTCAAACAGAAAACCGCATT
TGTGTTTGAAAGCTTTCTAGACCAT

BS33129.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
dia-RC 393 CG1768-PC 1..393 17..409 1965 100 Plus
dia-RD 3297 CG1768-PD 1..342 17..358 1710 100 Plus
dia-RE 3276 CG1768-PE 1..321 38..358 1605 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:52:11
Subject Length Description Subject Range Query Range Score Percent Strand
dia-RC 1775 CG1768-RC 135..532 13..410 1975 99.7 Plus
dia-RD 3797 CG1768-RD 135..480 13..358 1715 99.7 Plus
dia-RE 5260 CG1768-RE 520..842 36..358 1615 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:52:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20760524..20760898 36..410 1875 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:52:09 has no hits.

BS33129.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:26:48 Download gff for BS33129.complete
Subject Subject Range Query Range Percent Splice Strand
dia-RC 139..530 17..408 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:11 Download gff for BS33129.complete
Subject Subject Range Query Range Percent Splice Strand
dia-RC 139..530 17..408 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:11 Download gff for BS33129.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20760438..20760457 17..36 100 -> Plus
2L 20760525..20760896 37..408 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:26:48 Download gff for BS33129.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20760438..20760457 17..36 100 -> Plus
arm_2L 20760525..20760896 37..408 100   Plus

BS33129.pep Sequence

Translation from 16 to 408

> BS33129.pep
MRLKKLGMSRHEKTKSTGGGLLDSLFGRPSKSKGGTISSGTLAHGGRPVS
ADNYVVPGVEDFEQYIQQLSVAELDAKFLEIIEDMNIPKDKREPLLAKSK
EERQKMIMWHLKGKEHGASTRFQTENRICV*

BS33129.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:39
Subject Length Description Subject Range Query Range Score Percent Strand
dia-PC 130 CG1768-PC 1..130 1..130 670 100 Plus
dia-PD 1098 CG1768-PD 1..126 1..123 594 93.7 Plus
dia-PE 1091 CG1768-PE 1..119 8..123 560 93.3 Plus
dia-PB 1091 CG1768-PB 1..119 8..123 560 93.3 Plus
dia-PA 1091 CG1768-PA 1..119 8..123 560 93.3 Plus