BS33130.complete Sequence
1562 bp assembled on 2014-03-03
GenBank Submission: KX804960
> BS33130.complete
GAAGTTATCAGTCGACATGATGGGCTACATCATGGGTTGTGCTTGTTTCA
AAGAACCAAGAAAAGACAAGACTGATGCACAACAACAACAACACGGAGGC
AATGGCACAATATCCACGCCCAACATCGAGCAGCCCACCTGCCAGGGCTC
GATGCTGCCGCCCCCCGGAGGCGGTGGCCATCACCAGGTGGACGGGAGTG
GCAAGATGGAGCGGCCCAACACGCTCGCCGGCGCCAATAAGCTGACCCGT
CGCGGGGTCAACATCTGCTATCACAACGAGCACATGTATGGCGAAGATGG
AAAAATGGTGGGTGGTCCGCCGGGCAGCACTCCGCCCCCGTATCCGGGTG
GCAAACTACCGCCGGGCGTAATGCTCAGCGAACTGCCGGAGCCGCCGATT
CCGCTGTCGGAGATCGGACCGATCCCACCGCCCCCGATGTTCTCCACTCC
GAGTCCCACGCTCATCGCAGGACGACCGCACGGGCCAGGGGCCGTCAACG
ATCAGGATTATCAGCAGGACTACGACTACGATGATAACGATCCCGATCAG
GATGAGCTTGACTCGGACGATGAGTACGCCCCGTATGGTGGCAACCATGT
GCGCATGATGGACACGCAACGCGTCGAGGAAATTCCAGCCAAAGAGCCCA
AACCAAATGCAGTTCCTCTCAAGTCGGCGCTGAAGAAGAAGGGCGGTATG
CAGCCCGCTTCCGCCTCCACGCCGGTCACGCCCACCCAGGAACATGGAGC
GGGAAGTGCGGCAACGGCAGCGGCCATGGCAAACAGCAATGGCGGTATTG
GCTCGATGGCGGCAGCTGCCGCAGCTGCGGCCCAACAATCCGCCAACCAA
CGACCGCTGGTCGTTCGCCAGGATGCGGCGGGCAATAACTATTCGCTCAA
CAGGCAGCAAATGTTCAACATCCAATTGCCGTGCACCGTGGAGAACAAGG
AGAACGCCCGGCCATTTGTGATACGCGAAAGCAGCAGCGATAGTGACGAC
AGCGATGGCCATATCGTCTACAGGGACGAGGACAACGACAACACCCGGCT
GGCCAAACTGGCCCGCAAGGAGTCGCTGTCCCTGAAGCTGCAGCTCCGAC
CGGACAAGCAGGACCTGATCAACCGCAACATCCTGCACCAGGTCAACGAC
AACGAGCTCAAGGAGTCCAAGGAGGCGATCGGAGCACGCCTCATCCGGCG
GCTGTCCATGCGACCCACGGCCGAGGAGCTGGTCGAGCGCAACATCTTGA
AAACTCAATCACCCGCCGAGGAGAAGAAGCAGAAGGAGGAGAAGAAGTCG
TATCTGTTGCGCAAACTCAGCTTTCGGCCGACCGTCGAGGAGCTGAAGGA
GAAGAAGATCATCCGATTCAACGACTACATCGAGGTCACGCAGGCCCACG
ACTACGATCGGCGGGCGGACAAGCCGTGGACAAGACTGACGCCAAAGGAC
AAGGCCGCCATTCGCAAGGAGCTGAACGAGTTCAAGTCCTCCGAAATGGC
CGTCCACGAGGGCAGTCGGCATTTGACGAGATTCCATAGGCCATGAAAGC
TTTCTAGACCAT
BS33130.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:04:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-RJ | 1530 | CG32264-PJ | 1..1530 | 17..1546 | 7650 | 100 | Plus |
| CG32264-RB | 2373 | CG32264-PB | 879..2373 | 52..1546 | 7475 | 100 | Plus |
| CG32264-RM | 2784 | CG32264-PM | 1291..2784 | 53..1546 | 7470 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:04:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-RJ | 2609 | CG32264-RJ | 905..2434 | 17..1546 | 7650 | 100 | Plus |
| CG32264-RG | 2418 | CG32264-RG | 714..2243 | 17..1546 | 7650 | 100 | Plus |
| CG32264-RB | 4202 | CG32264-RB | 2533..4027 | 52..1546 | 7475 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:04:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3722156..3722523 | 900..533 | 1840 | 100 | Minus |
| 3L | 28110227 | 3L | 3718638..3718990 | 1253..901 | 1765 | 100 | Minus |
| 3L | 28110227 | 3L | 3718196..3718472 | 1530..1254 | 1385 | 100 | Minus |
| 3L | 28110227 | 3L | 3722856..3723105 | 537..288 | 1235 | 99.6 | Minus |
| 3L | 28110227 | 3L | 3723639..3723874 | 287..52 | 1180 | 100 | Minus |
| 3L | 28110227 | 3L | 3758407..3758443 | 53..17 | 185 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 15:04:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Damb\P-element_T | 3329 | Damb\P-element_T P_T 3329bp Derived from AF012414. | 877..942 | 1016..951 | 123 | 65.2 | Minus |
BS33130.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:25:59 Download gff for
BS33130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RG | 714..2242 | 17..1545 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:30:50 Download gff for
BS33130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32264-RG | 714..2242 | 17..1545 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:30:50 Download gff for
BS33130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3718196..3718472 | 1254..1530 | 100 | <- | Minus |
| 3L | 3718638..3718990 | 901..1253 | 100 | <- | Minus |
| 3L | 3722156..3722522 | 534..900 | 100 | <- | Minus |
| 3L | 3722860..3723105 | 288..533 | 100 | <- | Minus |
| 3L | 3723639..3723872 | 54..287 | 100 | <- | Minus |
| 3L | 3758407..3758443 | 17..53 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:25:59 Download gff for
BS33130.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3718196..3718472 | 1254..1530 | 100 | <- | Minus |
| arm_3L | 3718638..3718990 | 901..1253 | 100 | <- | Minus |
| arm_3L | 3722156..3722522 | 534..900 | 100 | <- | Minus |
| arm_3L | 3722860..3723105 | 288..533 | 100 | <- | Minus |
| arm_3L | 3723639..3723872 | 54..287 | 100 | <- | Minus |
| arm_3L | 3758407..3758443 | 17..53 | 100 | | Minus |
BS33130.pep Sequence
Translation from 16 to 1545
> BS33130.pep
MMGYIMGCACFKEPRKDKTDAQQQQHGGNGTISTPNIEQPTCQGSMLPPP
GGGGHHQVDGSGKMERPNTLAGANKLTRRGVNICYHNEHMYGEDGKMVGG
PPGSTPPPYPGGKLPPGVMLSELPEPPIPLSEIGPIPPPPMFSTPSPTLI
AGRPHGPGAVNDQDYQQDYDYDDNDPDQDELDSDDEYAPYGGNHVRMMDT
QRVEEIPAKEPKPNAVPLKSALKKKGGMQPASASTPVTPTQEHGAGSAAT
AAAMANSNGGIGSMAAAAAAAAQQSANQRPLVVRQDAAGNNYSLNRQQMF
NIQLPCTVENKENARPFVIRESSSDSDDSDGHIVYRDEDNDNTRLAKLAR
KESLSLKLQLRPDKQDLINRNILHQVNDNELKESKEAIGARLIRRLSMRP
TAEELVERNILKTQSPAEEKKQKEEKKSYLLRKLSFRPTVEELKEKKIIR
FNDYIEVTQAHDYDRRADKPWTRLTPKDKAAIRKELNEFKSSEMAVHEGS
RHLTRFHRP*
BS33130.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:03:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32264-PJ | 509 | CG32264-PJ | 1..509 | 1..509 | 2694 | 100 | Plus |
| CG32264-PM | 927 | CG32264-PM | 431..927 | 13..509 | 2623 | 100 | Plus |
| CG32264-PL | 759 | CG32264-PL | 263..759 | 13..509 | 2623 | 100 | Plus |
| CG32264-PK | 822 | CG32264-PK | 326..822 | 13..509 | 2623 | 100 | Plus |
| CG32264-PE | 998 | CG32264-PE | 502..998 | 13..509 | 2623 | 100 | Plus |
