BS33147.complete Sequence
329 bp assembled on 2014-01-22
GenBank Submission: KX802575
> BS33147.complete
GAAGTTATCAGTCGACATGGAGGAGGAGCGCGAGAAGATGAGGCAAGACA
TTCGCGATAAGTACAACATCAAGAAGAAGGAGGAGATCGTGGAGGCGGCC
CCCCAAGAAGAGCCCAATCCCCTGATGCGGAAAAAGAAGACGCCCGAGGA
ACTCGCCGCCGAAGCGGAGCAGGAAGAGCTCGACGATTTTACAAGTAAGT
CTTTGCTGCCACTGTCAAGTGCCGTTGAACCTGGCTCAGCTAGTGGCATC
TATATACTGCAATTGCAACCCACTAATTTCTCCGCTCCGATTGCTCCTGC
TCCTATTCTATAAAAGCTTTCTAGACCAT
BS33147.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:52:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cpx-RAB | 474 | CG32490-PAB | 178..474 | 17..313 | 1485 | 100 | Plus |
cpx-RZ | 297 | CG32490-PZ | 1..297 | 17..313 | 1485 | 100 | Plus |
cpx-RAA | 378 | CG32490-PAA | 127..304 | 17..194 | 890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:52:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cpx-RAB | 9682 | CG32490-RB | 601..897 | 17..313 | 1485 | 100 | Plus |
cpx-RZ | 2094 | CG32490-RZ | 655..951 | 17..313 | 1485 | 100 | Plus |
cpx-RAA | 3803 | CG32490-RA | 449..626 | 17..194 | 890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:52:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4295566..4295819 | 60..313 | 1270 | 100 | Plus |
3R | 32079331 | 3R | 4295242..4295286 | 17..61 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:52:17 has no hits.
BS33147.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:26:51 Download gff for
BS33147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cpx-RZ | 425..719 | 17..311 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:14 Download gff for
BS33147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cpx-RZ | 655..949 | 17..311 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:14 Download gff for
BS33147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4295242..4295286 | 17..61 | 100 | -> | Plus |
3R | 4295568..4295817 | 62..311 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:26:51 Download gff for
BS33147.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 120964..121008 | 17..61 | 100 | -> | Plus |
arm_3R | 121290..121539 | 62..311 | 100 | | Plus |
BS33147.pep Sequence
Translation from 16 to 312
> BS33147.pep
MEEEREKMRQDIRDKYNIKKKEEIVEAAPQEEPNPLMRKKKTPEELAAEA
EQEELDDFTSKSLLPLSSAVEPGSASGIYILQLQPTNFSAPIAPAPIL*
BS33147.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
cpx-PZ | 98 | CG32490-PZ | 1..98 | 1..98 | 490 | 100 | Plus |
cpx-PAB | 157 | CG32490-PAB | 60..157 | 1..98 | 490 | 100 | Plus |
cpx-PE | 138 | CG32490-PE | 60..128 | 1..69 | 310 | 91.3 | Plus |
cpx-PK | 83 | CG32490-PK | 1..59 | 1..59 | 300 | 100 | Plus |
cpx-PJ | 83 | CG32490-PJ | 1..59 | 1..59 | 300 | 100 | Plus |