Clone BS33149 Report

Search the DGRC for BS33149

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:331
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG43668-RA
Protein status:BS33149.pep: full length peptide match
Sequenced Size:575

Clone Sequence Records

BS33149.complete Sequence

575 bp assembled on 2014-01-22

GenBank Submission: KX800433

> BS33149.complete
GAAGTTATCAGTCGACATGTTAGCCACTTTGATTGGTCTTGCTCTGCTGC
TCCAAGCTAACACGATTGCAGGACAGGATTACCAAGTTTTTGGATCACCT
GGCGTACAAGTAATCTACCCGTCCTCATCGCAAGTTCAGGTCATTGGCGG
AAGACATTTCTTACGCAACGGATTGCGAAGGAATCTCACGATCAATGCGA
ACGCAACTAGTCAAAATTTTCAACTTATCAGTAGCTTGAGCAACGGAAAT
TCAGGCAACACTCCTCTTCGGAATTTCTTAAGGTCCTTGTTTGGCCGCCA
GCCAAATATCCAGTATGTAAACCTGAATTCCAGAGCCTTTAACGACGTCT
CCCAGGAGCCTCTATACTGGAATCCATATCGGTCCTTTGCGAGTCCAGTG
GTTTTGCCCCGCGCACGAGTTAAGACTGTAAGACAAGGTGTTCCACGACG
GATTTTGGTACGGAATCTGATGTCCACCAAATCCCAGACCACCAATGTGC
AATCCTTTAGGATTCCGATTCTTGAGAACGAATGGCAGTATGACCCGACA
TATGTATAAAAGCTTTCTAGACCAT

BS33149.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:53:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG43668-RA 543 CG43668-PA 1..543 17..559 2715 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:53:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG43668-RA 676 CG43668-RA 54..597 16..559 2720 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:52:59
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20791617..20792139 538..16 2615 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:52:59 has no hits.

BS33149.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:13 Download gff for BS33149.complete
Subject Subject Range Query Range Percent Splice Strand
CG43668-RA 60..595 22..557 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:35 Download gff for BS33149.complete
Subject Subject Range Query Range Percent Splice Strand
CG43668-RA 60..595 22..557 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:35 Download gff for BS33149.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20791543..20791561 539..557 100 <- Minus
2R 20791617..20792133 22..538 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:13 Download gff for BS33149.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16679048..16679066 539..557 100 <- Minus
arm_2R 16679122..16679638 22..538 100   Minus

BS33149.pep Sequence

Translation from 16 to 558

> BS33149.pep
MLATLIGLALLLQANTIAGQDYQVFGSPGVQVIYPSSSQVQVIGGRHFLR
NGLRRNLTINANATSQNFQLISSLSNGNSGNTPLRNFLRSLFGRQPNIQY
VNLNSRAFNDVSQEPLYWNPYRSFASPVVLPRARVKTVRQGVPRRILVRN
LMSTKSQTTNVQSFRIPILENEWQYDPTYV*

BS33149.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG43668-PA 180 CG43668-PA 1..180 1..180 920 100 Plus