BS33151.complete Sequence
1142 bp assembled on 2014-01-22
GenBank Submission: KX802580
> BS33151.complete
GAAGTTATCAGTCGACATGTGGTTACAGTGCGCGAGGAAACCAATACGTG
CAGACTTTTGGCTGCAGCTGCTCTGCGTGAGTTTTACACTCTTTCACCTG
GAATTCGCCGCGGCCCAAAATGCGGGAGTGGTGGCAGCTGCCGTGGCGGC
TGGACAAAACCAAACGCAGGTCTATGTGACGGATTCTTGCCTGCAAAAGC
CGTACCGCTGTCCTCATCCGAAGATCCAGTTCTATTTGTACACGAGACGC
ACCCAGGAGCAGCCGGAGTTCATAGATGTCCTGGATCCGAACGCCCTGTA
CTACACGCACTTCAATCCACGCCATCCCACCAAGATCATAATCCATGGAT
TCGGCGGCGGCAGGACTCTGAGTCCCAGTCCCGATCTGCGGGAGGCCTAC
TTCAGTGTGGGCGAGTACAACATCATCATAGTGGACTACGCGGATGCCGT
TAAGGAACCTTGTCTGAGTCAGATGGACTGGGCTCCTCGGTTCGGCAGCC
TGTGCATCTCCCAGCTGGTCAAATACCTCGCCCGACATCCTCGTGGCGTC
CAGCCGGACGACCTGCACTTCATTGGCTACAGTGTGGGTGCCCACATCGC
CGGTCTGGTGGCTAACTATTTGAAGCCGGAGGAGGGCAAGCTGGGCAGGA
TCACCGCGCTGGATCCCACGATATTCTTCTATGCCGGGGCCAACAACTCC
AGGGATCTGGATTCGACGGATGCACACTTCGTGGATGTTCTGCACACCGG
AGCTGGAATCCTGGGGCAGTGGCATTCCAGTGGTCATGCGGACTTCTATG
TCAACGGCGGCACGCGGCAACCAGCTTGTGTGGGTTCGGCAACCTTGTTT
CAAACGTTGGCTTGTGATCACACAAAAGTCACGCCGTACTTTATTGAATC
CATCACGACAACTCGCGGATTTTATGCGGGTCCTTGTCCCAACTTGTTCT
CCTATCTAATTGGTTGGTGTGAGCCCAAGGACTCGGAGTATGTGCTAATG
GGCGAACACTGTTCACACAAAGCTCGAGGGAATTATTATGTGACCACCAA
TGCCAAGGCGCCGTTTGCTCGCGGTTTTCCGGGAAAAGGACGATCGAATG
GGGAGTACCAGGGAGTACGGAGATAAAAGCTTTCTAGACCAT
BS33151.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:53:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18641-RC | 1110 | CG18641-PC | 1..1110 | 17..1126 | 5550 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:53:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18641-RC | 1790 | CG18641-RC | 421..1530 | 17..1126 | 5550 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:53:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2411286..2412027 | 851..110 | 3710 | 100 | Minus |
| 2L | 23513712 | 2L | 2411052..2411220 | 1020..852 | 845 | 100 | Minus |
| 2L | 23513712 | 2L | 2410884..2410994 | 1126..1016 | 540 | 99.1 | Minus |
| 2L | 23513712 | 2L | 2414809..2414902 | 110..17 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:53:07 has no hits.
BS33151.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:17 Download gff for
BS33151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18641-RC | 421..1528 | 17..1124 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:39 Download gff for
BS33151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18641-RC | 421..1528 | 17..1124 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:39 Download gff for
BS33151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2410886..2410989 | 1021..1124 | 100 | <- | Minus |
| 2L | 2411052..2411220 | 852..1020 | 100 | <- | Minus |
| 2L | 2411286..2412026 | 111..851 | 100 | <- | Minus |
| 2L | 2414809..2414902 | 17..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:17 Download gff for
BS33151.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2410886..2410989 | 1021..1124 | 100 | <- | Minus |
| arm_2L | 2411052..2411220 | 852..1020 | 100 | <- | Minus |
| arm_2L | 2411286..2412026 | 111..851 | 100 | <- | Minus |
| arm_2L | 2414809..2414902 | 17..110 | 100 | | Minus |
BS33151.pep Sequence
Translation from 16 to 1125
> BS33151.pep
MWLQCARKPIRADFWLQLLCVSFTLFHLEFAAAQNAGVVAAAVAAGQNQT
QVYVTDSCLQKPYRCPHPKIQFYLYTRRTQEQPEFIDVLDPNALYYTHFN
PRHPTKIIIHGFGGGRTLSPSPDLREAYFSVGEYNIIIVDYADAVKEPCL
SQMDWAPRFGSLCISQLVKYLARHPRGVQPDDLHFIGYSVGAHIAGLVAN
YLKPEEGKLGRITALDPTIFFYAGANNSRDLDSTDAHFVDVLHTGAGILG
QWHSSGHADFYVNGGTRQPACVGSATLFQTLACDHTKVTPYFIESITTTR
GFYAGPCPNLFSYLIGWCEPKDSEYVLMGEHCSHKARGNYYVTTNAKAPF
ARGFPGKGRSNGEYQGVRR*
BS33151.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:55:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18641-PC | 369 | CG18641-PC | 1..369 | 1..369 | 2014 | 100 | Plus |
| CG14034-PC | 338 | CG14034-PC | 33..311 | 65..353 | 512 | 39.8 | Plus |
| CG14034-PB | 338 | CG14034-PB | 33..311 | 65..353 | 512 | 39.8 | Plus |
| CG13282-PB | 484 | CG13282-PB | 72..354 | 65..353 | 496 | 36.5 | Plus |
| CG13282-PA | 484 | CG13282-PA | 72..354 | 65..353 | 496 | 36.5 | Plus |
