Clone BS33152 Report

Search the DGRC for BS33152

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:331
Well:52
Vector:pDNR-Dual
Associated Gene/TranscriptCG17147-RB
Protein status:BS33152.pep: full length peptide match
Sequenced Size:1046

Clone Sequence Records

BS33152.complete Sequence

1046 bp assembled on 2014-01-22

GenBank Submission: KX801479

> BS33152.complete
GAAGTTATCAGTCGACATGCTAAACCTCAAACTTGGAGTGCTTCTCGGAT
GCGTTCTCTTGTTGGCTACCGTAGCTCTTTCGGCGAGTGTCGGTGAATAC
GAGGAGCTGTGTCGCCTTTTCAAGAACGGGACCAAGGTTCGCAAGCCCGG
CACCTGCGACCAGTACATTCAGTGCTACGATGGCAACGGCACCGTCCTGA
CCTGCCCCTCCAACCAGTCCTTCAATCCCAGCAAGGGTAGTTGCGTGGAC
ACGTTGGCCAACAGCAACAAGTACTGCGGCAATCGCTGCGAGGGATTGGA
TGGCGAATGGGTGGCCGATCCGACCGAGTGCCACAAGTACTTCTACTGCA
TGAACGGCGTACCGCTGGCGGGGATGTGTCCCGTAGGCCAGCACTTCGAT
GAGCGCTCTCAGTCCTGCCTGTACGGCGTGGACTCCATGTGCGTGGATGT
GAACAACATTTGCGAGCTGGTGGCGGAAAATACGAAGTTCCGGAATGAGA
AGGACTGCGCCTACTACTATGAGTGTGACAAGACCGGTAACCATGCGTCC
AAGAGCTGCACTGTCACCTCCAAGAAGCGCGAGTATTTCGATGTGGAGAG
CGGCAATTGCGTGGAAGCCAATAAGGTGGAGTGCACCGCCCATTCGAAGG
AGAACGTCTGCACCAGCAGCACAACAATGACATTCAAATCCGACCAAGCC
ACCTGCCGTGGATACTTCGTATGCAAGGCCCTCTATCCCGTCGCCGACCT
GGATCCACTGTGGACGCAGTGCCCCGAGGGCTACTTCTTCGACGAGGATC
GGCAGCTCTGCGCCAATCCCACCACAGTGGTGTGCACCCACAACAGATGC
GACGGACGCGGCACGATGCTGGTGACCAGCAGCAGCAATAACTGTCACAA
CTACATCCGGTGTGTGGACAACAAGGAGGTGACGGAGGAAACCTGCCACT
GGGATCACTTCTTCGACGAGACAGTGGAAGCGTGCTCCTCCAAGATCATC
TACGATAAGTGTTGCGATGGCCGGGACTAAAAGCTTTCTAGACCAT

BS33152.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:53:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG17147-RB 1014 CG17147-PB 1..1014 17..1030 5070 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:53:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG17147-RB 1136 CG17147-RB 91..1106 16..1031 5080 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:53:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20224287..20225294 24..1031 5040 100 Plus
Blast to na_te.dros performed on 2014-11-28 14:53:10 has no hits.

BS33152.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:18 Download gff for BS33152.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RB 92..1103 17..1028 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:42 Download gff for BS33152.complete
Subject Subject Range Query Range Percent Splice Strand
CG17147-RB 92..1103 17..1028 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:42 Download gff for BS33152.complete
Subject Subject Range Query Range Percent Splice Strand
3L 20224279..20225291 17..1028 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:18 Download gff for BS33152.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20217379..20218391 17..1028 99   Plus

BS33152.pep Sequence

Translation from 16 to 1029

> BS33152.pep
MLNLKLGVLLGCVLLLATVALSASVGEYEELCRLFKNGTKVRKPGTCDQY
IQCYDGNGTVLTCPSNQSFNPSKGSCVDTLANSNKYCGNRCEGLDGEWVA
DPTECHKYFYCMNGVPLAGMCPVGQHFDERSQSCLYGVDSMCVDVNNICE
LVAENTKFRNEKDCAYYYECDKTGNHASKSCTVTSKKREYFDVESGNCVE
ANKVECTAHSKENVCTSSTTMTFKSDQATCRGYFVCKALYPVADLDPLWT
QCPEGYFFDEDRQLCANPTTVVCTHNRCDGRGTMLVTSSSNNCHNYIRCV
DNKEVTEETCHWDHFFDETVEACSSKIIYDKCCDGRD*

BS33152.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:55:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG17147-PB 337 CG17147-PB 1..337 1..337 1894 100 Plus
CG17145-PB 334 CG17145-PB 3..332 5..332 556 35.9 Plus
CG17145-PA 334 CG17145-PA 3..332 5..332 556 35.9 Plus
CG5883-PA 339 CG5883-PA 1..337 1..332 510 34 Plus
CG6996-PC 364 CG6996-PC 28..331 31..333 340 28.9 Plus