BS33156.complete Sequence
1232 bp assembled on 2014-01-22
GenBank Submission: KX803357
> BS33156.complete
GAAGTTATCAGTCGACATGCCCAGCACGGCGGGCAGTGCAGCTGGCGTTG
GTATGGGCGCCCTGATCAACAGTGCCGGCAGCAGCGCCAGTAGTGTCATG
GGCATTGGCATGGGCAGAGCAGCTGCTACGGGAGCAGGAGCACCAGGCAG
TTCGGGATCTGGAGCAGATGCCTCCGCCGCCGGCACTTTAATCGCCCAGA
GCACGGCGGGAACGAGCGCCGCCAGCAGTGGAACGATCACCTGGGACAAC
AATGGAACCCTGCGATCGATCAATCCCGGCGATTGGTCCATCGAACAGTG
CCTCGGGCCACATCACCTGTACTTTCAGCTCGGCTGGGCCTTTCTCTTCC
TAGCCTTTTTGGCTCCACACGGTCCCTACGGCGCCCTGTGGATGCGTGCC
ATGCTGCTCATTGGCTGCCTGATGATGGGCATGCATGGCTACTTGGTGGC
CTTTGCACCGGACGTCATCCTGTGGTCGGGCATGGGACTTTTTGTCAACT
TCATCTATCTCGTCGTGGTGCTATGCCGGCTGAGGCCTGTGCGATTCGAG
CAGGAAATCGAAGCGGTCTACCTGGCACTTTTCCAGCCGCTGCACGTGAC
GCGCCACCAGTTCAAGAAGGTGCTCAACTGCATGAAGGTGATACGTGCCC
TGAAGTACCAGGAGGTCTACGCCCAGGAGAAGGTCACCAAGGTCGACAGC
CTGTCGCTGGTGCTGAGCGGCAAACTGGTGGTGTCGCAGCATCAGCGCGC
CCTGCACATTGTGTTTCCCCATCAGTTCCTAGACTCGCCAGAATGGTTTG
GCGTCTCGACCGATGACTACTTTCAGGTCTCCATCATGGCCATGGAGGAG
TCGCGGGTGCTGATCTGGCATCGCGACAAGCTCAAATTGTCAATTATGGC
CGAGCCCTTCTTGCAGACCGTCTTCGATCACATTCTGGGCCGGGATGTGG
TCAAGAAGCTGATGCAGGTCACCCAGGTGAGCGAGTCGATAGCCAGCAAT
GGCTTCCTGCCCTCTGGTGGATATGCTGAGGATGCGGAGGACAAGCCCAT
GTTGATACTAAAGAAGAGTGTGGATGTGGGACACGGACTGACGGCCCTGA
TCAACCGGCAGCTACAGGCCCTGCCTAGGATATCGAAGTATTACGATTGC
GCTGGAGATCCGAATTCTTGGCGCCTTGGAAGGATCGATGAAACGGATCA
CGAAACGGCCGTTTGAAAGCTTTCTAGACCAT
BS33156.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:53:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bves-RC | 1200 | CG32513-PC | 1..1200 | 17..1216 | 6000 | 100 | Plus |
bves-RD | 1167 | CG32513-PD | 1..1103 | 17..1119 | 5515 | 100 | Plus |
bves-RB | 1245 | CG32513-PB | 1..1102 | 17..1118 | 5510 | 100 | Plus |
bves-RD | 1167 | CG32513-PD | 1102..1167 | 1151..1216 | 330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:53:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bves-RC | 3461 | CG32513-RC | 715..1917 | 17..1219 | 6015 | 100 | Plus |
bves-RD | 3428 | CG32513-RD | 715..1817 | 17..1119 | 5515 | 100 | Plus |
bves-RB | 3789 | CG32513-RB | 715..1816 | 17..1118 | 5510 | 100 | Plus |
bves-RD | 3428 | CG32513-RD | 1816..1884 | 1151..1219 | 345 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:53:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 21061009..21061559 | 17..567 | 2755 | 100 | Plus |
X | 23542271 | X | 21075364..21075522 | 565..723 | 795 | 100 | Plus |
X | 23542271 | X | 21075770..21075924 | 824..978 | 775 | 100 | Plus |
X | 23542271 | X | 21076039..21076182 | 975..1118 | 720 | 100 | Plus |
X | 23542271 | X | 21075592..21075696 | 724..828 | 525 | 100 | Plus |
X | 23542271 | X | 21080779..21080847 | 1151..1219 | 345 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:53:14 has no hits.
BS33156.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:20 Download gff for
BS33156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bves-RC | 715..1913 | 17..1215 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:44 Download gff for
BS33156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
bves-RC | 715..1913 | 17..1215 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:44 Download gff for
BS33156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 21075773..21075922 | 827..976 | 100 | -> | Plus |
X | 21076041..21076182 | 977..1118 | 100 | -> | Plus |
X | 21080047..21080079 | 1119..1151 | 100 | -> | Plus |
X | 21061009..21061557 | 17..565 | 100 | -> | Plus |
X | 21075365..21075522 | 566..723 | 100 | -> | Plus |
X | 21075592..21075694 | 724..826 | 100 | -> | Plus |
X | 21080780..21080843 | 1152..1215 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:20 Download gff for
BS33156.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20932036..20932584 | 17..565 | 100 | -> | Plus |
arm_X | 20946392..20946549 | 566..723 | 100 | -> | Plus |
arm_X | 20946619..20946721 | 724..826 | 100 | -> | Plus |
arm_X | 20946800..20946949 | 827..976 | 100 | -> | Plus |
arm_X | 20947068..20947209 | 977..1118 | 100 | -> | Plus |
arm_X | 20951074..20951106 | 1119..1151 | 100 | -> | Plus |
arm_X | 20951807..20951870 | 1152..1215 | 100 | | Plus |
BS33156.pep Sequence
Translation from 16 to 1215
> BS33156.pep
MPSTAGSAAGVGMGALINSAGSSASSVMGIGMGRAAATGAGAPGSSGSGA
DASAAGTLIAQSTAGTSAASSGTITWDNNGTLRSINPGDWSIEQCLGPHH
LYFQLGWAFLFLAFLAPHGPYGALWMRAMLLIGCLMMGMHGYLVAFAPDV
ILWSGMGLFVNFIYLVVVLCRLRPVRFEQEIEAVYLALFQPLHVTRHQFK
KVLNCMKVIRALKYQEVYAQEKVTKVDSLSLVLSGKLVVSQHQRALHIVF
PHQFLDSPEWFGVSTDDYFQVSIMAMEESRVLIWHRDKLKLSIMAEPFLQ
TVFDHILGRDVVKKLMQVTQVSESIASNGFLPSGGYAEDAEDKPMLILKK
SVDVGHGLTALINRQLQALPRISKYYDCAGDPNSWRLGRIDETDHETAV*
BS33156.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:55:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
bves-PC | 399 | CG32513-PC | 1..399 | 1..399 | 2067 | 100 | Plus |
bves-PD | 388 | CG32513-PD | 1..388 | 1..399 | 1983 | 97.2 | Plus |
bves-PB | 414 | CG32513-PB | 1..367 | 1..367 | 1889 | 100 | Plus |
bves-PA | 414 | CG32513-PA | 1..367 | 1..367 | 1889 | 100 | Plus |