BS33159.complete Sequence
974 bp assembled on 2014-01-22
GenBank Submission: KX805467
> BS33159.complete
GAAGTTATCAGTCGACATGAAGATCTGTGCTCAAATAATTGGAATTATAG
TTTTAGCAAGGCTCCTTAAGGAGGTTGATGGAAAAGGAGAAATTTCAGAC
CTGGAATCTCTGGCCAAGACCGATGCAATGTACACTGCCCTGCTGAAGGA
GATAAATTCAACTTTTCACAAAAGACCGTTGCTGGCAGAAAAAAATGCAG
AGTTCGAAAAGAATTTCCAAACAGTTTTAGTTGCTCTAAACTTAAGCATG
TATGAAATAGCTACCAAAATTGATGTCTACACCGACTTTACAGTTTACAA
TCAAATCCGATTAGAACTCGAAAGGGAAATCTTTAAGAAGCTACAAGTTG
CGGAAAGACTTCAGAAGATGGAAAACCTTATGCCAACGTGTCGCATCTTC
TTTGCCAATCAGCAAGTGCAACTCATTGGCAGTTTCAGTCAATCCAACCT
CATGAAATTGGAAATATTGAATCATCCGGGTCCAGAGTGCGAAAATGTTG
AAGTGCAAAAAATTTTCATCGCGCCAACTTCATCGACTGCCAGGCCCGAT
AACTACGATACAGAGATTCTAAAAGTTTTGGCCAAATACAGGACACGTCC
GTGGGGAAAAAAGACGTATCGGGATTTCGACGAGAAAATATGGAACCTTT
TTATGGCCATAAACAGCGAAGAGCAAACATTTAAAAAGAACGCATTAGCC
GCATTCAAAAAATATGACGAAGATCGGGCCATTTTGGACAAAGCATTGGC
ACACCGAATTGCAGAATTCGAGAAACAAATTCCGCATGAGACAAATCCGT
GCAGGGTCGATCTAATTCGCTTGAAAAAAGAACTGGGACGCGCAATGTTT
GAAACTACGCAGAAAAAGCACAACAGTTTGGTCGCTACGAACTATGTAAA
GACTTGTCTCAATAATCAAATAAAATTGTTCTTGGCAATGAATGATTTAA
CATTGTAAAAGCTTTCTAGACCAT
BS33159.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:52:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33325-RB | 942 | CG33325-PB | 1..942 | 17..958 | 4710 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:52:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33325-RB | 965 | CG33325-RB | 24..965 | 17..958 | 4710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:52:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8678953..8679809 | 959..103 | 4285 | 100 | Minus |
| 3R | 32079331 | 3R | 8679951..8680011 | 77..17 | 305 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 14:52:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jockey | 5020 | jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). | 2927..2999 | 150..220 | 116 | 67.6 | Plus |
BS33159.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:10 Download gff for
BS33159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33325-RB | 24..963 | 17..956 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:31 Download gff for
BS33159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33325-RB | 24..963 | 17..956 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:31 Download gff for
BS33159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8678956..8679808 | 104..956 | 100 | <- | Minus |
| 3R | 8679860..8679885 | 78..103 | 100 | <- | Minus |
| 3R | 8679951..8680011 | 17..77 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:10 Download gff for
BS33159.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4504678..4505530 | 104..956 | 100 | <- | Minus |
| arm_3R | 4505582..4505607 | 78..103 | 100 | <- | Minus |
| arm_3R | 4505673..4505733 | 17..77 | 100 | | Minus |
BS33159.pep Sequence
Translation from 16 to 957
> BS33159.pep
MKICAQIIGIIVLARLLKEVDGKGEISDLESLAKTDAMYTALLKEINSTF
HKRPLLAEKNAEFEKNFQTVLVALNLSMYEIATKIDVYTDFTVYNQIRLE
LEREIFKKLQVAERLQKMENLMPTCRIFFANQQVQLIGSFSQSNLMKLEI
LNHPGPECENVEVQKIFIAPTSSTARPDNYDTEILKVLAKYRTRPWGKKT
YRDFDEKIWNLFMAINSEEQTFKKNALAAFKKYDEDRAILDKALAHRIAE
FEKQIPHETNPCRVDLIRLKKELGRAMFETTQKKHNSLVATNYVKTCLNN
QIKLFLAMNDLTL*
BS33159.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33325-PB | 313 | CG33325-PB | 1..313 | 1..313 | 1595 | 100 | Plus |
