BS33161.complete Sequence
758 bp assembled on 2014-01-22
GenBank Submission: KX804046
> BS33161.complete
GAAGTTATCAGTCGACATGGTTGTGGGCCTGATTTTGCGAGCGGGCGTTG
TCTATGCTGTGGTAATGGTCACCAAGAACTACGGCGTGTGGGAATCTCCA
AACAAGACGCAAGATGTGTACGATGAAACCGTGGAGCGCATCGAACCCTA
CGCCGATCAGGCGCGACGTAAACTAAATATATGCCCGCCTAGGCCGCCAC
CGGAGGGAGAATGGTCCTTCTTTGGCATCTACTACTACAACAAATTAGTT
AAATCGGTTTTCGACTTACTAAGCGTCTTTCCCGCTGGACTAGCTGCGTT
TTTGGAGAAAGTACCAAGCTATGTCAACGCTTTTAACGAAACCATTCAAA
AGTACATTAAGGAGAGCCAGTCTAAGAAGAAAGAAATAACGATATCCAAG
GGACAGCTGGACGAGACTCCTCTGGTCAGACCTCCCGGACTGGTGCCACC
GCATTGCAAAGACAAGAACTGTCCGAAGGCTCCTCTGATTCCACCAGGAT
GCGACCGGAACAGGGATAGCTTTATCTACGAGCCGCGTTTACCCAAGAAG
CCACCGTGCGAGTGCGCCAAGTGCAAGCAACGTCAGGCGGAGAATTGGAA
GGACAACAAACGCAAGTGCCCCAGAATACCGAGCAGTGAAGCCAAGTGTA
GATGTGGAGAGGGTCCCCAGTCGGAAGCCCGCTCGGAGCCCATCAAATCG
TGCAAACAGTGCCGAAAGACGCCTCGAGAAACCGCTACCTAGAAGCTTTC
TAGACCAT
BS33161.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:53:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43328-RB | 726 | CG43328-PB | 1..726 | 17..742 | 3630 | 100 | Plus |
CG43328-RA | 726 | CG43328-PA | 1..726 | 17..742 | 3630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:53:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43328-RB | 874 | CG43328-RB | 64..791 | 17..744 | 3640 | 100 | Plus |
CG43328-RA | 1526 | CG43328-RA | 716..1443 | 17..744 | 3640 | 100 | Plus |
CG43327-RA | 1526 | CG43327-RA | 716..1443 | 17..744 | 3640 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:53:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17032570..17033297 | 744..17 | 3640 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:53:28 has no hits.
BS33161.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:26 Download gff for
BS33161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43327-RA | 631..1356 | 17..742 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:51 Download gff for
BS33161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43327-RA | 716..1441 | 17..742 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:51 Download gff for
BS33161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17032572..17033297 | 17..742 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:26 Download gff for
BS33161.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12920077..12920802 | 17..742 | 100 | | Minus |
BS33161.pep Sequence
Translation from 16 to 741
> BS33161.pep
MVVGLILRAGVVYAVVMVTKNYGVWESPNKTQDVYDETVERIEPYADQAR
RKLNICPPRPPPEGEWSFFGIYYYNKLVKSVFDLLSVFPAGLAAFLEKVP
SYVNAFNETIQKYIKESQSKKKEITISKGQLDETPLVRPPGLVPPHCKDK
NCPKAPLIPPGCDRNRDSFIYEPRLPKKPPCECAKCKQRQAENWKDNKRK
CPRIPSSEAKCRCGEGPQSEARSEPIKSCKQCRKTPRETAT*
BS33161.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:55:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43328-PB | 241 | CG43328-PB | 1..241 | 1..241 | 1315 | 100 | Plus |
CG43328-PA | 241 | CG43328-PA | 1..241 | 1..241 | 1315 | 100 | Plus |
CG7603-PA | 122 | CG7603-PA | 1..109 | 1..109 | 156 | 28.4 | Plus |