Clone BS33161 Report

Search the DGRC for BS33161

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:331
Well:61
Vector:pDNR-Dual
Associated Gene/TranscriptCG43328-RA
Protein status:BS33161.pep: full length peptide match
Sequenced Size:758

Clone Sequence Records

BS33161.complete Sequence

758 bp assembled on 2014-01-22

GenBank Submission: KX804046

> BS33161.complete
GAAGTTATCAGTCGACATGGTTGTGGGCCTGATTTTGCGAGCGGGCGTTG
TCTATGCTGTGGTAATGGTCACCAAGAACTACGGCGTGTGGGAATCTCCA
AACAAGACGCAAGATGTGTACGATGAAACCGTGGAGCGCATCGAACCCTA
CGCCGATCAGGCGCGACGTAAACTAAATATATGCCCGCCTAGGCCGCCAC
CGGAGGGAGAATGGTCCTTCTTTGGCATCTACTACTACAACAAATTAGTT
AAATCGGTTTTCGACTTACTAAGCGTCTTTCCCGCTGGACTAGCTGCGTT
TTTGGAGAAAGTACCAAGCTATGTCAACGCTTTTAACGAAACCATTCAAA
AGTACATTAAGGAGAGCCAGTCTAAGAAGAAAGAAATAACGATATCCAAG
GGACAGCTGGACGAGACTCCTCTGGTCAGACCTCCCGGACTGGTGCCACC
GCATTGCAAAGACAAGAACTGTCCGAAGGCTCCTCTGATTCCACCAGGAT
GCGACCGGAACAGGGATAGCTTTATCTACGAGCCGCGTTTACCCAAGAAG
CCACCGTGCGAGTGCGCCAAGTGCAAGCAACGTCAGGCGGAGAATTGGAA
GGACAACAAACGCAAGTGCCCCAGAATACCGAGCAGTGAAGCCAAGTGTA
GATGTGGAGAGGGTCCCCAGTCGGAAGCCCGCTCGGAGCCCATCAAATCG
TGCAAACAGTGCCGAAAGACGCCTCGAGAAACCGCTACCTAGAAGCTTTC
TAGACCAT

BS33161.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:53:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG43328-RB 726 CG43328-PB 1..726 17..742 3630 100 Plus
CG43328-RA 726 CG43328-PA 1..726 17..742 3630 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:53:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG43328-RB 874 CG43328-RB 64..791 17..744 3640 100 Plus
CG43328-RA 1526 CG43328-RA 716..1443 17..744 3640 100 Plus
CG43327-RA 1526 CG43327-RA 716..1443 17..744 3640 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:53:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17032570..17033297 744..17 3640 100 Minus
Blast to na_te.dros performed on 2014-11-28 14:53:28 has no hits.

BS33161.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:26 Download gff for BS33161.complete
Subject Subject Range Query Range Percent Splice Strand
CG43327-RA 631..1356 17..742 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:51 Download gff for BS33161.complete
Subject Subject Range Query Range Percent Splice Strand
CG43327-RA 716..1441 17..742 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:51 Download gff for BS33161.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17032572..17033297 17..742 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:26 Download gff for BS33161.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 12920077..12920802 17..742 100   Minus

BS33161.pep Sequence

Translation from 16 to 741

> BS33161.pep
MVVGLILRAGVVYAVVMVTKNYGVWESPNKTQDVYDETVERIEPYADQAR
RKLNICPPRPPPEGEWSFFGIYYYNKLVKSVFDLLSVFPAGLAAFLEKVP
SYVNAFNETIQKYIKESQSKKKEITISKGQLDETPLVRPPGLVPPHCKDK
NCPKAPLIPPGCDRNRDSFIYEPRLPKKPPCECAKCKQRQAENWKDNKRK
CPRIPSSEAKCRCGEGPQSEARSEPIKSCKQCRKTPRETAT*

BS33161.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:55:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG43328-PB 241 CG43328-PB 1..241 1..241 1315 100 Plus
CG43328-PA 241 CG43328-PA 1..241 1..241 1315 100 Plus
CG7603-PA 122 CG7603-PA 1..109 1..109 156 28.4 Plus