BS33163.complete Sequence
428 bp assembled on 2014-01-22
GenBank Submission: KX800423
> BS33163.complete
GAAGTTATCAGTCGACATGAAAGTATTCTTTGTGTTTGCCGCCCTTGCAG
CTCTATCTTTGGCATCTGCCGGGCTAACTGATTCCCAAAAGGCTGAGGCA
AAGCAGAGAGCCAAGGCCTGCGTCAAACAGGAGGGAATCACGAAGGAGCA
AGCTATTGCCCTGCGGTCTGGAAACTTTGCAGACTCCGATCCAAAGGTAA
AGTGCTTCGCCAACTGCTTCCTGGAGCAGACCGGCCTGGTGGCCAATGGG
CAGATAAAACCTGACGTGGTTTTGGCCAAACTAGGTCCCATCGCCGGCGA
AGCCAATGTCAAGGAGGTGCAGGCCAAGTGTGACTCGACCAAGGGAGCCG
ACAAGTGCGACACTAGCTATCTGCTGTACAAGTGCTACTACGAAAACCAC
GCCCAATTCTAAAAGCTTTCTAGACCAT
BS33163.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:53:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56e-RB | 396 | CG8462-PB | 1..396 | 17..412 | 1980 | 100 | Plus |
| Obp56e-RA | 399 | CG8462-PA | 1..399 | 17..412 | 1915 | 99.2 | Plus |
| Obp56d-RB | 396 | CG11218-PB | 112..396 | 128..412 | 255 | 72.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:53:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56e-RB | 529 | CG8462-RB | 52..448 | 16..412 | 1985 | 100 | Plus |
| Obp56e-RA | 532 | CG8462-RA | 52..451 | 16..412 | 1920 | 99.2 | Plus |
| Obp56d-RB | 922 | CG11218-RB | 277..561 | 128..412 | 255 | 72.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:53:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19712510..19712851 | 71..412 | 1710 | 100 | Plus |
| 2R | 25286936 | 2R | 19712396..19712451 | 16..71 | 280 | 100 | Plus |
| 2R | 25286936 | 2R | 19703285..19703569 | 412..128 | 255 | 72.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:53:36 has no hits.
BS33163.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:28 Download gff for
BS33163.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56e-RB | 53..446 | 17..410 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:55 Download gff for
BS33163.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp56e-RB | 53..446 | 17..410 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:55 Download gff for
BS33163.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19712397..19712450 | 17..70 | 100 | -> | Plus |
| 2R | 19712510..19712849 | 71..410 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:28 Download gff for
BS33163.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15599902..15599955 | 17..70 | 100 | -> | Plus |
| arm_2R | 15600015..15600354 | 71..410 | 100 | | Plus |
BS33163.pep Sequence
Translation from 16 to 411
> BS33163.pep
MKVFFVFAALAALSLASAGLTDSQKAEAKQRAKACVKQEGITKEQAIALR
SGNFADSDPKVKCFANCFLEQTGLVANGQIKPDVVLAKLGPIAGEANVKE
VQAKCDSTKGADKCDTSYLLYKCYYENHAQF*
BS33163.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:55:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp56e-PB | 131 | CG8462-PB | 1..131 | 1..131 | 671 | 100 | Plus |
| Obp56e-PA | 132 | CG8462-PA | 1..132 | 1..131 | 659 | 99.2 | Plus |
| Obp56d-PB | 131 | CG11218-PB | 1..129 | 1..129 | 448 | 64.3 | Plus |
| Obp56d-PA | 131 | CG11218-PA | 1..129 | 1..129 | 448 | 64.3 | Plus |
| Obp56a-PA | 139 | CG11797-PA | 1..128 | 1..124 | 234 | 36.7 | Plus |
