BS33166.complete Sequence
578 bp assembled on 2014-01-22
GenBank Submission: KX802560
> BS33166.complete
GAAGTTATCAGTCGACATGGATCCACATAGTGCGGACAACTGCAAGTGCC
ACAAGCAGACGCAGCCGGCACAGCAGACGTTAAGCGACATGGACTTCGAT
CGAGGCATTTGGAATGCAGCTATCTATAACGAAGTGGAGCGTGTAAGAGA
GTTTATCAAGAAGGGCCAGTCGATGGCTCGCGATGACTGCGACTATACGG
CTCTGCACTATGCGGCCCGCAATGGGAACGAGCCCATCTGCAAGCTGCTT
CTCGACGAGGGCAAGGCAGACGTGAATGCTGTGACCAAAGCAGGAGCCAC
CGCGCTGCATCGTGCAGCCATGATGGGCCACTTGGAAATCGTGAAGCTAC
TGGTCGAGCACAAGGCTAATCTTCTGCTGCAGGACGAGAGCGGACAGACC
GCTTTGCATCGAGCAGTGATGCGGGGCCACCTGGAGGTGTGTCGCATTCT
GCTGGCAAAGGAGCCAACACTTAAGCTGGTCAAGGATAAAAAGGACAAAA
TTGCATTTGAGTACATCATGGAGAACGCCAATGATGATTTTAAGCTGCTG
CTGAAGCCCTAAAAGCTTTCTAGACCAT
BS33166.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:53:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44001-RE | 546 | CG44001-PE | 1..546 | 17..562 | 2730 | 100 | Plus |
CG44001-RD | 546 | CG44001-PD | 1..546 | 17..562 | 2730 | 100 | Plus |
CG44001-RC | 546 | CG44001-PC | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:53:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44001-RE | 2431 | CG44001-RE | 1299..1845 | 17..563 | 2735 | 100 | Plus |
CG44001-RD | 2415 | CG44001-RD | 1283..1829 | 17..563 | 2735 | 100 | Plus |
CG44001-RC | 2281 | CG44001-RC | 1149..1695 | 17..563 | 2735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:53:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 5047542..5047779 | 326..563 | 1190 | 100 | Plus |
2L | 23513712 | 2L | 5047271..5047480 | 118..327 | 1050 | 100 | Plus |
2L | 23513712 | 2L | 5047104..5047206 | 17..119 | 515 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:53:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dbif\P-element_O | 2986 | Dbif\P-element_O P_O 2986bp Derived from X71634. | 1447..1530 | 523..445 | 110 | 64.3 | Minus |
BS33166.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:28 Download gff for
BS33166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44001-RC | 1149..1692 | 17..560 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:56 Download gff for
BS33166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG44001-RC | 1149..1692 | 17..560 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:56 Download gff for
BS33166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 5047543..5047776 | 327..560 | 100 | | Plus |
2L | 5047104..5047206 | 17..119 | 100 | -> | Plus |
2L | 5047273..5047479 | 120..326 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:28 Download gff for
BS33166.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 5047543..5047776 | 327..560 | 100 | | Plus |
arm_2L | 5047104..5047206 | 17..119 | 100 | -> | Plus |
arm_2L | 5047273..5047479 | 120..326 | 100 | -> | Plus |
BS33166.pep Sequence
Translation from 16 to 561
> BS33166.pep
MDPHSADNCKCHKQTQPAQQTLSDMDFDRGIWNAAIYNEVERVREFIKKG
QSMARDDCDYTALHYAARNGNEPICKLLLDEGKADVNAVTKAGATALHRA
AMMGHLEIVKLLVEHKANLLLQDESGQTALHRAVMRGHLEVCRILLAKEP
TLKLVKDKKDKIAFEYIMENANDDFKLLLKP*
BS33166.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:55:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG44001-PE | 181 | CG44001-PE | 1..181 | 1..181 | 946 | 100 | Plus |
CG44001-PD | 181 | CG44001-PD | 1..181 | 1..181 | 946 | 100 | Plus |
CG44001-PC | 181 | CG44001-PC | 1..181 | 1..181 | 946 | 100 | Plus |
CG44001-PB | 181 | CG44001-PB | 1..181 | 1..181 | 946 | 100 | Plus |
CG44001-PA | 181 | CG44001-PA | 1..181 | 1..181 | 946 | 100 | Plus |