BS33167.complete Sequence
452 bp assembled on 2014-01-22
GenBank Submission: KX800998
> BS33167.complete
GAAGTTATCAGTCGACATGTCCTGGTCAAGTGCACTAATCAAAGATATCT
CGAAACCAGAAAATTTGATCATTTCGTCAGAAATCGCAGTGGTCATAGCA
GACAAGTTTCCCAAGGCGCAGCATCACTACTTGGTGCTACCATTGGCCGA
CATTCCCAGCATCTTTCACTTGAACCGGAGCCATCTGTCGCTTTTGGAGG
AGCTGCATCTGCTGGCCAGGAACGTTGTGGAAGTGAAAGGAGTCCGGTGG
CAGGACTTCAACGTGGGATTTCACGCGGAGCCGAGCATGCAAAGGCTCCA
CCTGCACGTCATCTCCAAGGACTTCGTATCAACAAGCCTGAAGACCAAGA
AGCATTGGAACTCATTCAACACCGAGCTGTTTGTGCCCTACACAAGTAAG
GCTATTAGAACACGGCGCAGGCTACAGGCTTCATGAAAGCTTTCTAGACC
AT
BS33167.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:53:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5316-RA | 420 | CG5316-PA | 1..420 | 17..436 | 2100 | 100 | Plus |
| CG5316-RB | 1989 | CG5316-PB | 1..379 | 17..395 | 1895 | 100 | Plus |
| CG5316-RC | 1989 | CG5316-PC | 1..379 | 17..395 | 1895 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:53:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5316-RA | 2610 | CG5316-RA | 203..622 | 17..436 | 2100 | 100 | Plus |
| CG5316-RB | 2483 | CG5316-RB | 203..581 | 17..395 | 1895 | 100 | Plus |
| CG5316-RC | 2376 | CG5316-RC | 96..474 | 17..395 | 1895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:53:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19403893..19404159 | 170..436 | 1335 | 100 | Plus |
| 3R | 32079331 | 3R | 19403670..19403822 | 17..169 | 765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:53:44 has no hits.
BS33167.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:27:30 Download gff for
BS33167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5316-RA | 203..621 | 17..435 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:25:58 Download gff for
BS33167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5316-RA | 203..621 | 17..435 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:25:58 Download gff for
BS33167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19403670..19403822 | 17..169 | 100 | -> | Plus |
| 3R | 19403893..19404158 | 170..435 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:27:30 Download gff for
BS33167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 15229392..15229544 | 17..169 | 100 | -> | Plus |
| arm_3R | 15229615..15229880 | 170..435 | 100 | | Plus |
BS33167.pep Sequence
Translation from 16 to 435
> BS33167.pep
MSWSSALIKDISKPENLIISSEIAVVIADKFPKAQHHYLVLPLADIPSIF
HLNRSHLSLLEELHLLARNVVEVKGVRWQDFNVGFHAEPSMQRLHLHVIS
KDFVSTSLKTKKHWNSFNTELFVPYTSKAIRTRRRLQAS*
BS33167.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5316-PA | 139 | CG5316-PA | 1..139 | 1..139 | 713 | 100 | Plus |
| CG5316-PB | 662 | CG5316-PB | 1..126 | 1..126 | 654 | 100 | Plus |
| CG5316-PC | 662 | CG5316-PC | 1..126 | 1..126 | 654 | 100 | Plus |
| CG5316-PB | 662 | CG5316-PB | 232..351 | 7..125 | 221 | 38.3 | Plus |
| CG5316-PC | 662 | CG5316-PC | 232..351 | 7..125 | 221 | 38.3 | Plus |
| CG5316-PD | 572 | CG5316-PD | 142..261 | 7..125 | 221 | 38.3 | Plus |
| CG5316-PD | 572 | CG5316-PD | 1..36 | 91..126 | 193 | 100 | Plus |
