BS33177.complete Sequence
1679 bp assembled on 2014-03-06
GenBank Submission: KX803400
> BS33177.complete
GAAGTTATCAGTCGACATGAGTAGTATGGCTAAATCGCCAGATATGCGAA
CTCCAGGGTGCTGCTCCCCCTTGCGTACAAAGGAATTGCTGGAGAGACAA
AGGTCCAGTAGGTGCACCCCCGCAAAAGGATATCTAACCCCACGCAACTG
CCAGAGCCCCAAACACCCAGAGATGCGGATACCTTCCATATTCGTTACCG
ATGCCGACTACGGCTTGGAGCGCCCGAAACAATTGCTACAGCGCCTGGAG
CGATCACTATATCGATCTTCCTCTGCTTCCAAAGTACCACCAAAACACTC
ATTGTTAGCTTCCCAGAACAGGCAGCGGACCTGGGAAGGACCCAAAACAC
CAGAGTTCCGTAGCCGTACCAACAAAACTATACCCGCTTCGGAACCTCGT
CCAAGACGTGCTAAGGAACTTCTGGAGGATCTTAGGTCCAAGCATCAAGG
AACTCCTGCCACGAAAATTCCGTCCCAGAGGAATCCAAAGGAAAACCAAG
AACTTTCAAAGAGCCATACATGCATACCATCCTCGGAGCCACAGCCTATC
CGTCCAAAATTGATCCTCGAACGGGAGCGCCAGGAGTCTATAACCAATCG
CTTGGCATCAACTTCTATTGACCGCCTAAAAACAAAGCCACCAAGGAGTA
GCTTTACATCGAGCAGGCTTCTAGTGCCACAGATGGGATTTTCGTACCCC
AAGGATCCGAAAAGGCTTCACGAATCCGACAAAGGAATCAAGCTGACCAC
CTCAAAGCGAAAGTTGGACTTCAAAACTGAGCTGGGGACTGACTGGCTGC
GGCGGGAGCTGGAAAAGATTGGCAAGGAATGGCGGAAAAAGACTGACTAC
CAGTTACGTCAGCTTATCTCGGGTTTTGTGAAACAACTAGTGCGCCTCCT
ACCCTTTAATGGGATAACATTTTCGCATCTTAGCAGGGATTGCTATGTGC
AGCAGATGGTGGAGGCACTGCAGCAGCTGCAGTACACCAAAAAGGTGAAC
AAAAGCTGGCTTCAAACGCCGAACAGCACACAAGCCATCGCCCATGTGCT
GGAATTACTCAATTTCTTGCTGGATGTCCTCGAACATCGAAAAGGAGAAG
GCATGTGTGCGCTCCCCGTTGTTTCTGAAAAGCAGAGAATTGAACAACTT
GCATCGGCATCTGGTACATCCTATGATGTAATGAGCCTGCAACAGAAGTT
TGAAAACATAAAAATAGAGAAAGAAAGATTAAACAATTACCAAGAATCTC
TGATGCCGGAATCCCCCGTATCCAAGGACATGGATAAAGTTACGGAGCGC
GATGGGAATCAGGACTTCGTCAGACTCCTGGATTTTCAAAAAGAGACCCT
CCATGAACTCCAACTGCAACGCCTGCGTCTCCAGGAGTTCTCCGAGCTCG
TAAGCCTCGCCAAGATAAAATTAAAACGCTGTTGTAAGGCTAACAAGCAA
TGCATCGAAGCCTTTAATGACCAAATACAAGACTTGGCCGACTGTGTGGT
TTTAAGAAACAGAAATATCGGCCTTCTAACCCAATTACATTTGAACGATA
ATCCAAAGGAGGAGGAGTTGCACGAACGTATGAAGCAACTGCAGCGGCTG
TATGAGGATAATTATTCAAATCTTCTACAGCTAAACATTAAGCCGCCCCA
GGGAAGCCCTTAGAAGCTTTCTAGACCAT
BS33177.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:07:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kebab-RB | 1647 | CG31672-PB | 1..1647 | 17..1663 | 8235 | 100 | Plus |
| Kebab-RA | 1644 | CG31672-PA | 1..1644 | 17..1663 | 8155 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:07:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kebab-RB | 2188 | CG31672-RB | 117..1763 | 17..1663 | 8235 | 100 | Plus |
| Kebab-RA | 2173 | CG31672-RA | 117..1760 | 17..1663 | 8155 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:07:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2046426..2047577 | 512..1663 | 5760 | 100 | Plus |
| 2L | 23513712 | 2L | 2045699..2046011 | 48..360 | 1565 | 100 | Plus |
| 2L | 23513712 | 2L | 2046065..2046218 | 360..513 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:07:46 has no hits.
BS33177.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-06 11:10:12 Download gff for
BS33177.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kebab-RB | 117..1763 | 17..1663 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:31:58 Download gff for
BS33177.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Kebab-RB | 117..1763 | 17..1663 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:31:58 Download gff for
BS33177.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2045610..2045641 | 17..48 | 100 | -> | Plus |
| 2L | 2045700..2046011 | 49..360 | 100 | -> | Plus |
| 2L | 2046066..2046218 | 361..513 | 100 | -> | Plus |
| 2L | 2046428..2047577 | 514..1663 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-06 11:10:12 Download gff for
BS33177.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2046066..2046218 | 361..513 | 100 | -> | Plus |
| arm_2L | 2045610..2045641 | 17..48 | 100 | -> | Plus |
| arm_2L | 2045700..2046011 | 49..360 | 100 | -> | Plus |
| arm_2L | 2046428..2047577 | 514..1663 | 100 | | Plus |
BS33177.pep Sequence
Translation from 16 to 1662
> BS33177.pep
MSSMAKSPDMRTPGCCSPLRTKELLERQRSSRCTPAKGYLTPRNCQSPKH
PEMRIPSIFVTDADYGLERPKQLLQRLERSLYRSSSASKVPPKHSLLASQ
NRQRTWEGPKTPEFRSRTNKTIPASEPRPRRAKELLEDLRSKHQGTPATK
IPSQRNPKENQELSKSHTCIPSSEPQPIRPKLILERERQESITNRLASTS
IDRLKTKPPRSSFTSSRLLVPQMGFSYPKDPKRLHESDKGIKLTTSKRKL
DFKTELGTDWLRRELEKIGKEWRKKTDYQLRQLISGFVKQLVRLLPFNGI
TFSHLSRDCYVQQMVEALQQLQYTKKVNKSWLQTPNSTQAIAHVLELLNF
LLDVLEHRKGEGMCALPVVSEKQRIEQLASASGTSYDVMSLQQKFENIKI
EKERLNNYQESLMPESPVSKDMDKVTERDGNQDFVRLLDFQKETLHELQL
QRLRLQEFSELVSLAKIKLKRCCKANKQCIEAFNDQIQDLADCVVLRNRN
IGLLTQLHLNDNPKEEELHERMKQLQRLYEDNYSNLLQLNIKPPQGSP*
BS33177.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:05:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Kebab-PB | 548 | CG31672-PB | 1..548 | 1..548 | 2835 | 100 | Plus |
| Kebab-PA | 547 | CG31672-PA | 1..547 | 1..548 | 2819 | 99.8 | Plus |
