BS33181.complete Sequence
2177 bp assembled on 2014-07-17
GenBank Submission: KX800524
> BS33181.complete
GAAGTTATCAGTCGACATGAAAACCTCTGGCGCCAGCAATACTGACGAGC
TGAACAAGTCATCGCACAGCAAAGTCAGCAAAAAGTCCACTAAGTCGCGA
TCTAAGTCGGCGAAATTGGAGTTGACTGGAAAGAATTCCCTGTCGGCATC
CGCATCATCCTCCATCGCATCCGCAGTGAGCGGGGGCGTTGCAGTGGGCA
GCCTGCCGGCCACGCCCACTCACCTAAACATGGTGACAACGCCCACCACG
CCAACATCTAGTCTGGGTAACTACAATCTGTTTGACGCCTCATTTGCGGT
AGCAGGAAGTGGTGGGCACGGACTTGCAGGCGGCATCGCGGGCGCAGAAG
CCTCTGGCAACTCCAGTCGAATGAAGAGCTATGCTGGTTTCGATCCGCGC
AGCATCAAGATCTTTTGGGAGCAGCACGACCAGACCGATGTGGAACTCTC
CCAGGATGTGTGCGCCCGTTTGGCGGAAGATGCCTCCTACAAAGTCTGGG
AGCTGATCAATAATGTCAAAATATACTCGCGCCACTCGGGCGGAGTGGTG
ACATACGACCTGGTGAACGAAGTGCTAAAAGATGCCGATGTGCCGCCTAT
GCTGGGTGCGATGGACAGCGACTGGGACCGGATCGACTATGACGGCAGTT
TTTACTTTCACTCGGATAAGATCTTCGAGCTGAGCGCGGAGTTTCAGAAG
GAAGTCAATCTGTGCACACCTGATGATGCAGACTTTCAGAGCATCTGCCC
AGTGGAGGATAAGCACATGGACCAACTAAGACAGTGTGTCCAGAGTCTTG
TGACGGCAGCCCTTTTTGCGGACAGCAAATCCCAGACGGCCGCCGTCTGC
CATGCTTTTCAGACACCCCTGATGGGATCTATCTACCGAGTGATTGTGAG
TAAGATGGTCCAGTTGCTAGCCTTTAAGCAGCAGGACCATTTGAGCCAGC
GATGCTGGCGACTGCTCCGAGCATGCAACTACAACGCCACTGCTAATCAC
AATGCCTGCCGGCCGGAGTACTTCAACCTGGCCGAGGTACTGGTCAGCCA
GCTAATGGCACCTTACGAAACTATCAAAGCTCCACACGTCGACCCAGATC
CGGGACAAACCACCTCCATCAAAATGGAGTTTGAAGAAGAACTAAAGGTT
GAGCCAGACCAGTGCCATAATCCGGAAACCCAGGAAAATCCGGAGGTCAT
GGGAGTAGAGAAACAGGAGCAAGAACCCCAGATGTTTCCGGGTGAGAGCA
CCATGGAACACACAATCTACAAGCTGCAATCGGAGGAGGAGGAATTGAAT
CCTCAGCCGGAGGCGGAACACCTATCCAGCTACTTTGCCTGTCCAGTCGG
CAATGGCCTGGTGGACGAGCTGTGTGAAACTATAGGACAGCTGGCATCTC
AAAGTGGTTACCTACATGCAGAGTGCCTGTTTTTGATCAAGAGACGCCTA
GCGAGATTCTTCGAAGGTCGCCACGTCAGCAGTGAGAGAGACTTTAGGTA
TATCAGTAGAGCAGTGCGCGGTCTCATTGCCCTGGGAGAATATGCCTTTC
GTGAGTTTATTCCCTACATCTACAAACTGCGCGTCGAGGAAATCCCGGAT
AGCCTGTGGCCGGATCTGGCTCCGGCTGCCATCTTCCTTGGCGGTCATGA
TGACGTATACCTGTATGAATGGCTGGAGTACGGATGCGGTGCTGCTCTGC
AGCCCTTCTTGGTCCACTATGCGCGAGCCTACGAAAAGATGGTAACCAGA
CGGTATGTGAAGGCCAAACAACCCGCTTACAGAATAGAATCAGTGCCGGG
AGTGCGTCGGTTGGAATGGAGTACTCTTGCGGCAGCCATGTGCCACGGAG
ACGATCCTAGCAAGGCACTCAAACCGAAGCCTACGCTCTGCGAGGCTTTC
CCCGACCTTCAGTCACCAAATCTTCAGCTCAACTGCGCGGGCAACATCCG
CTTTAAGTTTGCAGGATGCCGCCCGGTGCTGCTGAAGCCGAAGGTTGCGA
CTGTTCCCCACTCCGAAGACTCGCCTTCGTCGGCAGCGAACGGTGGTGGG
GGTGGCGGTGCCAGCTCCGACATCCTGATCGCCAAACGAAAACTCTTTAA
GCCCCTGACCAACGTGAGAAAGTGGTCGCCCATCAGTGGCTATCACTACC
TAAGGATCTGAAAGCTTTCTAGACCAT
BS33181.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:11:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Saf6-RB | 2145 | CG3883-PB | 1..2145 | 17..2161 | 10725 | 100 | Plus |
| Saf6-RA | 2154 | CG3883-PA | 1..2154 | 17..2161 | 10600 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:11:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Saf6-RB | 2407 | CG3883-RB | 120..2267 | 17..2164 | 10740 | 100 | Plus |
| Saf6-RA | 2416 | CG3883-RA | 120..2276 | 17..2164 | 10615 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:11:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 814243..815221 | 1490..512 | 4895 | 100 | Minus |
| 2L | 23513712 | 2L | 813454..813893 | 2164..1725 | 2200 | 100 | Minus |
| 2L | 23513712 | 2L | 815475..815831 | 373..17 | 1785 | 100 | Minus |
| 2L | 23513712 | 2L | 813950..814186 | 1725..1489 | 1185 | 100 | Minus |
| 2L | 23513712 | 2L | 815275..815413 | 511..373 | 695 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 15:11:35 has no hits.
BS33181.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-17 10:53:52 Download gff for
BS33181.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Saf6-RB | 120..2263 | 17..2160 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:33:17 Download gff for
BS33181.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Saf6-RB | 120..2263 | 17..2160 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:33:17 Download gff for
BS33181.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 813458..813893 | 1725..2160 | 100 | <- | Minus |
| 2L | 813951..814184 | 1491..1724 | 100 | <- | Minus |
| 2L | 814243..815221 | 512..1490 | 100 | <- | Minus |
| 2L | 815275..815412 | 374..511 | 100 | <- | Minus |
| 2L | 815475..815831 | 17..373 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-17 10:53:52 Download gff for
BS33181.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 813458..813893 | 1725..2160 | 100 | <- | Minus |
| arm_2L | 813951..814184 | 1491..1724 | 100 | <- | Minus |
| arm_2L | 814243..815221 | 512..1490 | 100 | <- | Minus |
| arm_2L | 815275..815412 | 374..511 | 100 | <- | Minus |
| arm_2L | 815475..815831 | 17..373 | 100 | | Minus |
BS33181.pep Sequence
Translation from 16 to 2160
> BS33181.pep
MKTSGASNTDELNKSSHSKVSKKSTKSRSKSAKLELTGKNSLSASASSSI
ASAVSGGVAVGSLPATPTHLNMVTTPTTPTSSLGNYNLFDASFAVAGSGG
HGLAGGIAGAEASGNSSRMKSYAGFDPRSIKIFWEQHDQTDVELSQDVCA
RLAEDASYKVWELINNVKIYSRHSGGVVTYDLVNEVLKDADVPPMLGAMD
SDWDRIDYDGSFYFHSDKIFELSAEFQKEVNLCTPDDADFQSICPVEDKH
MDQLRQCVQSLVTAALFADSKSQTAAVCHAFQTPLMGSIYRVIVSKMVQL
LAFKQQDHLSQRCWRLLRACNYNATANHNACRPEYFNLAEVLVSQLMAPY
ETIKAPHVDPDPGQTTSIKMEFEEELKVEPDQCHNPETQENPEVMGVEKQ
EQEPQMFPGESTMEHTIYKLQSEEEELNPQPEAEHLSSYFACPVGNGLVD
ELCETIGQLASQSGYLHAECLFLIKRRLARFFEGRHVSSERDFRYISRAV
RGLIALGEYAFREFIPYIYKLRVEEIPDSLWPDLAPAAIFLGGHDDVYLY
EWLEYGCGAALQPFLVHYARAYEKMVTRRYVKAKQPAYRIESVPGVRRLE
WSTLAAAMCHGDDPSKALKPKPTLCEAFPDLQSPNLQLNCAGNIRFKFAG
CRPVLLKPKVATVPHSEDSPSSAANGGGGGGASSDILIAKRKLFKPLTNV
RKWSPISGYHYLRI*
BS33181.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:09:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Saf6-PB | 714 | CG3883-PB | 1..714 | 1..714 | 3752 | 100 | Plus |
| Saf6-PA | 717 | CG3883-PA | 1..717 | 1..714 | 3738 | 99.6 | Plus |
