BS33193.complete Sequence
557 bp assembled on 2014-01-22
GenBank Submission: KX804575
> BS33193.complete
GAAGTTATCAGTCGACATGCGTTCCTTACCGATGTTTTGGCGCATGGCCG
AGGAGATGGCACGGATGCCACGCCTCTCCTCGCCCTTTCACGCCTTCTTC
CACGAGCCGCCCGTTTGGAGTGTGGCGCTACCGAGGAACTGGCAGCAGAT
TGCCCGCTGGCAGGAGCAGGAGTTCGCTCCGCCGGCCACCGTCAACAAGG
ATGGCTACAAACTCACCCTGGACGTCAAGGACTACAGCGAGCTAAAGGTC
AAGGTGCTGGACGAGAGCGTTGTCCTGGTGGAGGGAAAATCAGAGCAGCA
GGAGGCCGAACAAGGTGGCTATAGCTCCAGGCACTTCCTCCGCCGCTTCG
TCCTGCCGGAAGGATACGAGGCGGACAAGGTGACCTCAACGCTGAGCAGC
GACGGCGTCCTGACCATCAGTGTGCCCAATCCTCCAGGCGTGCAGGAGAC
ACTCAAGGAGCGTGAGGTGACCATCGAGCAGACTGGCGAGCCGGCAAAGA
AGTCCGCCGAGGAGCCAAATGACAAAGCCGCCAGTCAGTAGAAGCTTTCT
AGACCAT
BS33193.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:50:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp22-RB | 525 | CG4460-PB | 1..525 | 17..541 | 2625 | 100 | Plus |
| Hsp22-RA | 525 | CG4460-PA | 1..525 | 17..541 | 2625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp67Bb-RB | 1900 | CG4456-RB | 1187..1713 | 17..543 | 2635 | 100 | Plus |
| Hsp22-RB | 968 | CG4460-RB | 255..781 | 17..543 | 2635 | 100 | Plus |
| Hsp22-RA | 1900 | CG4460-RA | 1187..1713 | 17..543 | 2635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:50:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9374251..9374777 | 17..543 | 2635 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:50:52 has no hits.
BS33193.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-22 13:26:18 Download gff for
BS33193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp67Bb-RB | 1187..1711 | 17..541 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:24:38 Download gff for
BS33193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hsp22-RA | 1187..1711 | 17..541 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:24:38 Download gff for
BS33193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9374251..9374775 | 17..541 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-22 13:26:18 Download gff for
BS33193.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9367351..9367875 | 17..541 | 100 | | Plus |
BS33193.pep Sequence
Translation from 16 to 540
> BS33193.pep
MRSLPMFWRMAEEMARMPRLSSPFHAFFHEPPVWSVALPRNWQQIARWQE
QEFAPPATVNKDGYKLTLDVKDYSELKVKVLDESVVLVEGKSEQQEAEQG
GYSSRHFLRRFVLPEGYEADKVTSTLSSDGVLTISVPNPPGVQETLKERE
VTIEQTGEPAKKSAEEPNDKAASQ*
BS33193.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hsp22-PB | 174 | CG4460-PB | 1..174 | 1..174 | 906 | 100 | Plus |
| Hsp22-PA | 174 | CG4460-PA | 1..174 | 1..174 | 906 | 100 | Plus |
| Hsp23-PB | 186 | CG4463-PB | 1..180 | 1..174 | 287 | 39.7 | Plus |
| Hsp23-PA | 186 | CG4463-PA | 1..180 | 1..174 | 287 | 39.7 | Plus |
| Hsp26-PB | 208 | CG4183-PB | 68..182 | 43..157 | 251 | 44.4 | Plus |
