BS33307.complete Sequence
1286 bp assembled on 2014-01-24
GenBank Submission: KX800651
> BS33307.complete
GAAGTTATCAGTCGACATGGAGCAGTGGAACAATGTGGAGCTGACGAACA
TGTCCAAAAAGTCGTATACCCTGAATCATGCCTACGATGCCGCCGAGAAG
TTGAACAAGGAAAACACGGCAAAGTCCTCGAATGGCAATGGCACCAGTGC
CGATGAATCAACAGCTGCAGATGGCGATCTCCTCAAGCCAGGATCGGACG
TGCGCCCAAAAGTGGAGCCCGAGGACGTGGAGAGCCTGCTGCGTCGCCTC
TACGGGATCACGATAAGCGAGGTTAAGGAAATCGTCGCCTACGACGATCG
CAACTTCTTTGTCAAGGAGGATAGTAATGTTAAGAACCCCCTCATTGTAA
CCCACTGTCCACACGGATACGTCCTGAAAATCCTCAACTCACTGGACTCT
AAGAAAGAGGACTTCGTGGATGCCCAAAACCAGATGCTGCTTTACTTGGG
AAAACACAGTGTGAAATGCCCACGACCAGTAGCCAATGCAACAGGAAAGT
ATTACTCTGTGGAACGGCTGAATGGGAATTCGAATGTGGTGCGACTGCTG
GAATTTATACCGGGAGAAATCTTCCACCAGGTGCCGGTGACGAAGCACCT
GCTCTACCGCAGCGGCGAATACTTGGCCAGGTTGGATCGAGCCCTCAAGA
ACTTCACCCACCAGGCATATGAAAGCCACAAGACCTTGTGGATGCTTCAG
AGTGTTCCCGAGCTTAGGCAATTCCTGTACGTGGTGAAGGATCAGGAGCA
GCGGCTTATCTGCGACGAGGTGATCGATGCCTTTGAAGCCAAGGTTCTGA
GCCAACTGCCATCCATGGAGCACCAGATCATCCATGGGGACTTCAACGAA
CAAAATATAGTGGTGGAGCAGGTGCCCAATCAAACTGAATATACCATCAA
GGGAGTTATTGATTTCGGTGATACGAGCAAATCGCCACTGATCTTCGAAA
TTGGAATTGCCCTCACTTATATGATACTGCAGGCCAACGATTTGGCCAAT
GGTGGCATATTTCTGTCCGGTTATACCAGTCTGAACCCAATTGAGAATTC
CGAGCTGGCCCTTCTCAAGTACTGTGTTACTGCCCGATTTGTTCAGAGCC
TGGTAATGGGACTCTACACCCACACGCTGCATCCCACAAATGAGTACCTC
CTGGTGACCCAGGAAAAGGGATGGAAGCTCCTTCAGAAGCTGTGGCGCGA
GAGCTTTGACGATATTGATGAGCTGTGGGCAAGCACTGGACACCAGTACT
TGACGCAGAGCAATAAATAAAAGCTTTCTAGACCAT
BS33307.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:55:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31751-RC | 1254 | CG31751-PC | 1..1254 | 17..1270 | 6270 | 100 | Plus |
| CG31751-RB | 1254 | CG31751-PB | 1..1254 | 17..1270 | 6270 | 100 | Plus |
| CG31751-RA | 1254 | CG31751-PA | 1..1254 | 17..1270 | 6270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:55:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31751-RC | 1902 | CG31751-RC | 268..1521 | 17..1270 | 6270 | 100 | Plus |
| CG31751-RB | 1842 | CG31751-RB | 139..1392 | 17..1270 | 6270 | 100 | Plus |
| CG31751-RA | 1971 | CG31751-RA | 268..1521 | 17..1270 | 6270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:55:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18682444..18683265 | 449..1270 | 4110 | 100 | Plus |
| 2L | 23513712 | 2L | 18678854..18679161 | 17..324 | 1540 | 100 | Plus |
| 2L | 23513712 | 2L | 18682263..18682390 | 323..450 | 640 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:55:36 has no hits.
BS33307.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:49:37 Download gff for
BS33307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31751-RA | 268..1512 | 17..1261 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:26:53 Download gff for
BS33307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31751-RA | 268..1512 | 17..1261 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:26:53 Download gff for
BS33307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18678854..18679161 | 17..324 | 100 | -> | Plus |
| 2L | 18682265..18682389 | 325..449 | 100 | -> | Plus |
| 2L | 18682445..18683256 | 450..1261 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:49:37 Download gff for
BS33307.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18678854..18679161 | 17..324 | 100 | -> | Plus |
| arm_2L | 18682265..18682389 | 325..449 | 100 | -> | Plus |
| arm_2L | 18682445..18683256 | 450..1261 | 100 | | Plus |
BS33307.pep Sequence
Translation from 16 to 1269
> BS33307.pep
MEQWNNVELTNMSKKSYTLNHAYDAAEKLNKENTAKSSNGNGTSADESTA
ADGDLLKPGSDVRPKVEPEDVESLLRRLYGITISEVKEIVAYDDRNFFVK
EDSNVKNPLIVTHCPHGYVLKILNSLDSKKEDFVDAQNQMLLYLGKHSVK
CPRPVANATGKYYSVERLNGNSNVVRLLEFIPGEIFHQVPVTKHLLYRSG
EYLARLDRALKNFTHQAYESHKTLWMLQSVPELRQFLYVVKDQEQRLICD
EVIDAFEAKVLSQLPSMEHQIIHGDFNEQNIVVEQVPNQTEYTIKGVIDF
GDTSKSPLIFEIGIALTYMILQANDLANGGIFLSGYTSLNPIENSELALL
KYCVTARFVQSLVMGLYTHTLHPTNEYLLVTQEKGWKLLQKLWRESFDDI
DELWASTGHQYLTQSNK*
BS33307.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:56:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31751-PC | 417 | CG31751-PC | 1..417 | 1..417 | 2171 | 100 | Plus |
| CG31751-PB | 417 | CG31751-PB | 1..417 | 1..417 | 2171 | 100 | Plus |
| CG31751-PA | 417 | CG31751-PA | 1..417 | 1..417 | 2171 | 100 | Plus |
