BS33308.complete Sequence
1553 bp assembled on 2014-03-06
GenBank Submission: KX803201
> BS33308.complete
GAAGTTATCAGTCGACATGGAAGACGCCGTGGAGGCCCTTTTCATCAGCA
CGAGCAGCGAGGACAACACGACATGCAGCGTGCAGGATTTGCGGACAGGC
ACAGACCTGATGCGCTACAAGGGCGGTGGATGCGCCCAGCACCACAGCCT
GAACATGATCCACCTGAACTACGTGATGGCGGCGAACTCCGCCAAGCCAC
TGCTCCACGTGTGGCCCATCAACAAGCAAGAGCAGATGGCCGGACTGCGG
TTCGTGGTGCCCGGCAAGGTCAACGCCTTGGCCCTGACGCCTGATGGGAA
CTTCTTGGTGGCCGGCATCCAGGAGAACATCTATCTATGGCACATGAGCT
CCGGCCGTATGCTTAACACCCTGTCCAAGCACTACCAGGCGATCACTTGC
CTGCGCTTCACGGACAACGGTGAGCACTTCATCAGCGGCGGCAAAGACGG
AGCTGTGCTTGTCTGGGATCTCACCTTCTCCGCCGCCCCACTGGACACGG
GCGGGGGCAAGGATAGCACGGAGCCGTTGTACAGCTTTAACGATCACGGT
CTGGCGGTCACTGATCTATACTCCGGCATCGGAGGCATCCGTTCCTATCT
GTACACCGTATCGTTGGATCGCTGCTGCAAGGTATATGACCTGTGCGGGG
GCGTCCTGCTGCTGAGTGTGGTGTTCCCAGTGGCCCTGCATAGCGTGATT
GTCAGCAAGATGGAAACTAGGGTGTATGTTGGCTCCAGTGACGGCAAGGT
GTTTGTCTTTAATATGGAAAACGCGCCGCGCATGAAGGAATATCACCTAG
AGGGGGAGGAAATCCAGGCCTTTGTGGGCCACACATACGGCAAGGCCATC
ACCTGCCTGGCTCTGAATATAAGCGCTACAACTCTGGTCTCCGGGGGCGA
GGACAATCAGGTCTGCGTCTGGGACGTGGGCAGCAGGCAACTTATTAAGA
GCCTGTCCCAAAAAGGCTCGGTAACCAATCTGCATATCCGCCTGCTCAGC
CCAGCCATCTTTCTGCCGGAACACAAGCAGCCGCAGATGTTCGCCGACAG
TCTAAAGCGAATGATTAGTCCGTGGGATGAGAATGACTGTATCGAGCTCT
TCGATCCGGACTACTCCGGGGGACGCAAGACACCGGAGCTGGACTACACC
CAAAGTCATCCGGGTACGGATGAGGAGATAATACTCAAACTTATAGCGTC
CATGAGTTCGGGAAAGAACGAGGACGACGAAGGAATTGAGGCGGAAACCA
AAGCTACAGATGTCGAGGATTCCGAGGTCGAAGAAGAAGAACCTGAATCC
GAGCCAATGGAAACCGCCTCCAAGGAAGCTGAGTCCGAAAAATCGTATGC
AGAATATCAGCCAGACTCAGCACAGACAAGCGACGAAAGAGTGCAAGAGC
TGCAGGCCGAGAATGCGCGCCTCAAAGCGCAGTCAATGCGCTTGTTCCAG
ATAGCTTTCAAGTATATTACTAGCGATACCAATGGCCAGGCTGAAATCAC
AGAGAAGACAAAGCGCAAGAAAGCGCGGAAGACATAGAAGCTTTCTAGAC
CAT
BS33308.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:08:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14805-RA | 1521 | CG14805-PA | 1..1521 | 17..1537 | 7605 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:08:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14805-RA | 1704 | CG14805-RA | 109..1631 | 15..1537 | 7615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:08:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1877425..1878198 | 15..788 | 3870 | 100 | Plus |
| X | 23542271 | X | 1878253..1879004 | 786..1537 | 3760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:08:13 has no hits.
BS33308.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-06 11:10:22 Download gff for
BS33308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14805-RA | 111..1631 | 17..1537 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:32:10 Download gff for
BS33308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14805-RA | 111..1631 | 17..1537 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:32:10 Download gff for
BS33308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1877427..1878197 | 17..787 | 100 | -> | Plus |
| X | 1878255..1879004 | 788..1537 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-06 11:10:22 Download gff for
BS33308.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1771460..1772230 | 17..787 | 100 | -> | Plus |
| arm_X | 1772288..1773037 | 788..1537 | 100 | | Plus |
BS33308.pep Sequence
Translation from 16 to 1536
> BS33308.pep
MEDAVEALFISTSSEDNTTCSVQDLRTGTDLMRYKGGGCAQHHSLNMIHL
NYVMAANSAKPLLHVWPINKQEQMAGLRFVVPGKVNALALTPDGNFLVAG
IQENIYLWHMSSGRMLNTLSKHYQAITCLRFTDNGEHFISGGKDGAVLVW
DLTFSAAPLDTGGGKDSTEPLYSFNDHGLAVTDLYSGIGGIRSYLYTVSL
DRCCKVYDLCGGVLLLSVVFPVALHSVIVSKMETRVYVGSSDGKVFVFNM
ENAPRMKEYHLEGEEIQAFVGHTYGKAITCLALNISATTLVSGGEDNQVC
VWDVGSRQLIKSLSQKGSVTNLHIRLLSPAIFLPEHKQPQMFADSLKRMI
SPWDENDCIELFDPDYSGGRKTPELDYTQSHPGTDEEIILKLIASMSSGK
NEDDEGIEAETKATDVEDSEVEEEEPESEPMETASKEAESEKSYAEYQPD
SAQTSDERVQELQAENARLKAQSMRLFQIAFKYITSDTNGQAEITEKTKR
KKARKT*
BS33308.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14805-PA | 506 | CG14805-PA | 1..506 | 1..506 | 2629 | 100 | Plus |
| wds-PB | 361 | CG17437-PB | 87..324 | 54..313 | 183 | 22.4 | Plus |
| wds-PA | 361 | CG17437-PA | 87..324 | 54..313 | 183 | 22.4 | Plus |
| fzy-PA | 526 | CG4274-PA | 256..526 | 44..325 | 159 | 24.1 | Plus |
